Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 25771 | 77536;77537;77538 | chr2:178568821;178568820;178568819 | chr2:179433548;179433547;179433546 |
N2AB | 24130 | 72613;72614;72615 | chr2:178568821;178568820;178568819 | chr2:179433548;179433547;179433546 |
N2A | 23203 | 69832;69833;69834 | chr2:178568821;178568820;178568819 | chr2:179433548;179433547;179433546 |
N2B | 16706 | 50341;50342;50343 | chr2:178568821;178568820;178568819 | chr2:179433548;179433547;179433546 |
Novex-1 | 16831 | 50716;50717;50718 | chr2:178568821;178568820;178568819 | chr2:179433548;179433547;179433546 |
Novex-2 | 16898 | 50917;50918;50919 | chr2:178568821;178568820;178568819 | chr2:179433548;179433547;179433546 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | None | None | 1.0 | D | 0.639 | 0.795 | 0.809015641971 | gnomAD-4.0.0 | 6.84433E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99599E-07 | 0 | 0 |
V/G | rs1184590631 | -3.718 | 1.0 | D | 0.88 | 0.841 | 0.952205082084 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 5.59E-05 | None | 0 | None | 0 | 0 | 0 |
V/G | rs1184590631 | -3.718 | 1.0 | D | 0.88 | 0.841 | 0.952205082084 | gnomAD-4.0.0 | 6.84433E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 2.52372E-05 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.9127 | likely_pathogenic | 0.9004 | pathogenic | -2.681 | Highly Destabilizing | 1.0 | D | 0.639 | neutral | D | 0.566633677 | None | None | N |
V/C | 0.985 | likely_pathogenic | 0.9846 | pathogenic | -2.109 | Highly Destabilizing | 1.0 | D | 0.793 | deleterious | None | None | None | None | N |
V/D | 0.9992 | likely_pathogenic | 0.9993 | pathogenic | -3.565 | Highly Destabilizing | 1.0 | D | 0.891 | deleterious | D | 0.644342203 | None | None | N |
V/E | 0.9973 | likely_pathogenic | 0.9975 | pathogenic | -3.273 | Highly Destabilizing | 1.0 | D | 0.87 | deleterious | None | None | None | None | N |
V/F | 0.9702 | likely_pathogenic | 0.9682 | pathogenic | -1.505 | Destabilizing | 1.0 | D | 0.794 | deleterious | D | 0.578154567 | None | None | N |
V/G | 0.9704 | likely_pathogenic | 0.9724 | pathogenic | -3.222 | Highly Destabilizing | 1.0 | D | 0.88 | deleterious | D | 0.644342203 | None | None | N |
V/H | 0.9994 | likely_pathogenic | 0.9995 | pathogenic | -2.979 | Highly Destabilizing | 1.0 | D | 0.876 | deleterious | None | None | None | None | N |
V/I | 0.134 | likely_benign | 0.1111 | benign | -1.089 | Destabilizing | 0.998 | D | 0.596 | neutral | D | 0.525040281 | None | None | N |
V/K | 0.9983 | likely_pathogenic | 0.9985 | pathogenic | -2.271 | Highly Destabilizing | 1.0 | D | 0.87 | deleterious | None | None | None | None | N |
V/L | 0.8451 | likely_pathogenic | 0.8277 | pathogenic | -1.089 | Destabilizing | 0.995 | D | 0.648 | neutral | N | 0.516988039 | None | None | N |
V/M | 0.8989 | likely_pathogenic | 0.8801 | pathogenic | -1.358 | Destabilizing | 1.0 | D | 0.759 | deleterious | None | None | None | None | N |
V/N | 0.9973 | likely_pathogenic | 0.9972 | pathogenic | -2.885 | Highly Destabilizing | 1.0 | D | 0.903 | deleterious | None | None | None | None | N |
V/P | 0.9979 | likely_pathogenic | 0.9976 | pathogenic | -1.606 | Destabilizing | 1.0 | D | 0.871 | deleterious | None | None | None | None | N |
V/Q | 0.9977 | likely_pathogenic | 0.9978 | pathogenic | -2.572 | Highly Destabilizing | 1.0 | D | 0.893 | deleterious | None | None | None | None | N |
V/R | 0.9962 | likely_pathogenic | 0.9967 | pathogenic | -2.204 | Highly Destabilizing | 1.0 | D | 0.906 | deleterious | None | None | None | None | N |
V/S | 0.9871 | likely_pathogenic | 0.9863 | pathogenic | -3.354 | Highly Destabilizing | 1.0 | D | 0.864 | deleterious | None | None | None | None | N |
V/T | 0.9426 | likely_pathogenic | 0.9391 | pathogenic | -2.93 | Highly Destabilizing | 1.0 | D | 0.658 | neutral | None | None | None | None | N |
V/W | 0.9996 | likely_pathogenic | 0.9997 | pathogenic | -2.049 | Highly Destabilizing | 1.0 | D | 0.865 | deleterious | None | None | None | None | N |
V/Y | 0.9977 | likely_pathogenic | 0.9977 | pathogenic | -1.834 | Destabilizing | 1.0 | D | 0.805 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.