Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 25777 | 77554;77555;77556 | chr2:178568803;178568802;178568801 | chr2:179433530;179433529;179433528 |
N2AB | 24136 | 72631;72632;72633 | chr2:178568803;178568802;178568801 | chr2:179433530;179433529;179433528 |
N2A | 23209 | 69850;69851;69852 | chr2:178568803;178568802;178568801 | chr2:179433530;179433529;179433528 |
N2B | 16712 | 50359;50360;50361 | chr2:178568803;178568802;178568801 | chr2:179433530;179433529;179433528 |
Novex-1 | 16837 | 50734;50735;50736 | chr2:178568803;178568802;178568801 | chr2:179433530;179433529;179433528 |
Novex-2 | 16904 | 50935;50936;50937 | chr2:178568803;178568802;178568801 | chr2:179433530;179433529;179433528 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/E | rs778484596 | 0.267 | 0.994 | N | 0.643 | 0.482 | 0.373537453441 | gnomAD-2.1.1 | 4.04E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.94E-06 | 0 |
K/E | rs778484596 | 0.267 | 0.994 | N | 0.643 | 0.482 | 0.373537453441 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | I | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
K/E | rs778484596 | 0.267 | 0.994 | N | 0.643 | 0.482 | 0.373537453441 | gnomAD-4.0.0 | 6.81906E-05 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 9.07126E-05 | 0 | 4.80523E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.5807 | likely_pathogenic | 0.6002 | pathogenic | 0.035 | Stabilizing | 0.999 | D | 0.679 | prob.neutral | None | None | None | None | I |
K/C | 0.7518 | likely_pathogenic | 0.7587 | pathogenic | -0.267 | Destabilizing | 1.0 | D | 0.809 | deleterious | None | None | None | None | I |
K/D | 0.9453 | likely_pathogenic | 0.9484 | pathogenic | -0.089 | Destabilizing | 1.0 | D | 0.737 | prob.delet. | None | None | None | None | I |
K/E | 0.564 | likely_pathogenic | 0.6024 | pathogenic | -0.094 | Destabilizing | 0.994 | D | 0.643 | neutral | N | 0.490870913 | None | None | I |
K/F | 0.864 | likely_pathogenic | 0.8679 | pathogenic | -0.226 | Destabilizing | 1.0 | D | 0.782 | deleterious | None | None | None | None | I |
K/G | 0.8359 | likely_pathogenic | 0.8449 | pathogenic | -0.135 | Destabilizing | 1.0 | D | 0.71 | prob.delet. | None | None | None | None | I |
K/H | 0.4731 | ambiguous | 0.4817 | ambiguous | -0.316 | Destabilizing | 1.0 | D | 0.726 | prob.delet. | None | None | None | None | I |
K/I | 0.5041 | ambiguous | 0.5503 | ambiguous | 0.4 | Stabilizing | 0.986 | D | 0.787 | deleterious | None | None | None | None | I |
K/L | 0.6141 | likely_pathogenic | 0.6214 | pathogenic | 0.4 | Stabilizing | 0.986 | D | 0.71 | prob.delet. | None | None | None | None | I |
K/M | 0.3423 | ambiguous | 0.3443 | ambiguous | 0.144 | Stabilizing | 0.999 | D | 0.726 | prob.delet. | D | 0.525735635 | None | None | I |
K/N | 0.6898 | likely_pathogenic | 0.7156 | pathogenic | 0.199 | Stabilizing | 0.999 | D | 0.775 | deleterious | N | 0.512574337 | None | None | I |
K/P | 0.9891 | likely_pathogenic | 0.9894 | pathogenic | 0.305 | Stabilizing | 1.0 | D | 0.733 | prob.delet. | None | None | None | None | I |
K/Q | 0.2893 | likely_benign | 0.2985 | benign | 0.013 | Stabilizing | 0.996 | D | 0.768 | deleterious | N | 0.496412806 | None | None | I |
K/R | 0.1079 | likely_benign | 0.1088 | benign | 0.011 | Stabilizing | 0.99 | D | 0.585 | neutral | N | 0.515171925 | None | None | I |
K/S | 0.7635 | likely_pathogenic | 0.776 | pathogenic | -0.245 | Destabilizing | 0.999 | D | 0.733 | prob.delet. | None | None | None | None | I |
K/T | 0.4736 | ambiguous | 0.4954 | ambiguous | -0.115 | Destabilizing | 0.998 | D | 0.728 | prob.delet. | N | 0.51830823 | None | None | I |
K/V | 0.4503 | ambiguous | 0.4747 | ambiguous | 0.305 | Stabilizing | 0.99 | D | 0.752 | deleterious | None | None | None | None | I |
K/W | 0.9045 | likely_pathogenic | 0.9078 | pathogenic | -0.265 | Destabilizing | 1.0 | D | 0.804 | deleterious | None | None | None | None | I |
K/Y | 0.7226 | likely_pathogenic | 0.7175 | pathogenic | 0.09 | Stabilizing | 0.998 | D | 0.774 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.