Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 25790 | 77593;77594;77595 | chr2:178568764;178568763;178568762 | chr2:179433491;179433490;179433489 |
N2AB | 24149 | 72670;72671;72672 | chr2:178568764;178568763;178568762 | chr2:179433491;179433490;179433489 |
N2A | 23222 | 69889;69890;69891 | chr2:178568764;178568763;178568762 | chr2:179433491;179433490;179433489 |
N2B | 16725 | 50398;50399;50400 | chr2:178568764;178568763;178568762 | chr2:179433491;179433490;179433489 |
Novex-1 | 16850 | 50773;50774;50775 | chr2:178568764;178568763;178568762 | chr2:179433491;179433490;179433489 |
Novex-2 | 16917 | 50974;50975;50976 | chr2:178568764;178568763;178568762 | chr2:179433491;179433490;179433489 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | None | None | 0.012 | N | 0.402 | 0.116 | 0.466907325337 | gnomAD-4.0.0 | 1.5936E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.86236E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.2409 | likely_benign | 0.1953 | benign | -0.989 | Destabilizing | 0.012 | N | 0.402 | neutral | N | 0.496794021 | None | None | N |
V/C | 0.8128 | likely_pathogenic | 0.7532 | pathogenic | -0.824 | Destabilizing | 0.869 | D | 0.486 | neutral | None | None | None | None | N |
V/D | 0.6519 | likely_pathogenic | 0.5783 | pathogenic | -0.618 | Destabilizing | 0.177 | N | 0.657 | prob.neutral | N | 0.464946322 | None | None | N |
V/E | 0.3905 | ambiguous | 0.3357 | benign | -0.664 | Destabilizing | 0.221 | N | 0.592 | neutral | None | None | None | None | N |
V/F | 0.2294 | likely_benign | 0.1954 | benign | -0.804 | Destabilizing | 0.177 | N | 0.548 | neutral | N | 0.489155972 | None | None | N |
V/G | 0.4667 | ambiguous | 0.3861 | ambiguous | -1.236 | Destabilizing | 0.177 | N | 0.661 | prob.neutral | N | 0.476467212 | None | None | N |
V/H | 0.6534 | likely_pathogenic | 0.5797 | pathogenic | -0.678 | Destabilizing | 0.869 | D | 0.648 | neutral | None | None | None | None | N |
V/I | 0.0686 | likely_benign | 0.0658 | benign | -0.445 | Destabilizing | None | N | 0.145 | neutral | N | 0.399131401 | None | None | N |
V/K | 0.4259 | ambiguous | 0.3688 | ambiguous | -0.877 | Destabilizing | 0.221 | N | 0.599 | neutral | None | None | None | None | N |
V/L | 0.1585 | likely_benign | 0.1352 | benign | -0.445 | Destabilizing | None | N | 0.217 | neutral | N | 0.45615812 | None | None | N |
V/M | 0.1336 | likely_benign | 0.1124 | benign | -0.438 | Destabilizing | 0.221 | N | 0.493 | neutral | None | None | None | None | N |
V/N | 0.4551 | ambiguous | 0.372 | ambiguous | -0.68 | Destabilizing | 0.221 | N | 0.683 | prob.neutral | None | None | None | None | N |
V/P | 0.768 | likely_pathogenic | 0.6966 | pathogenic | -0.59 | Destabilizing | 0.366 | N | 0.629 | neutral | None | None | None | None | N |
V/Q | 0.3608 | ambiguous | 0.3013 | benign | -0.868 | Destabilizing | 0.366 | N | 0.575 | neutral | None | None | None | None | N |
V/R | 0.3887 | ambiguous | 0.3341 | benign | -0.333 | Destabilizing | 0.221 | N | 0.658 | prob.neutral | None | None | None | None | N |
V/S | 0.3474 | ambiguous | 0.2759 | benign | -1.158 | Destabilizing | 0.039 | N | 0.603 | neutral | None | None | None | None | N |
V/T | 0.1598 | likely_benign | 0.137 | benign | -1.093 | Destabilizing | None | N | 0.303 | neutral | None | None | None | None | N |
V/W | 0.8489 | likely_pathogenic | 0.7986 | pathogenic | -0.925 | Destabilizing | 0.869 | D | 0.695 | prob.delet. | None | None | None | None | N |
V/Y | 0.6385 | likely_pathogenic | 0.565 | pathogenic | -0.64 | Destabilizing | 0.366 | N | 0.529 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.