Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 25798 | 77617;77618;77619 | chr2:178568740;178568739;178568738 | chr2:179433467;179433466;179433465 |
N2AB | 24157 | 72694;72695;72696 | chr2:178568740;178568739;178568738 | chr2:179433467;179433466;179433465 |
N2A | 23230 | 69913;69914;69915 | chr2:178568740;178568739;178568738 | chr2:179433467;179433466;179433465 |
N2B | 16733 | 50422;50423;50424 | chr2:178568740;178568739;178568738 | chr2:179433467;179433466;179433465 |
Novex-1 | 16858 | 50797;50798;50799 | chr2:178568740;178568739;178568738 | chr2:179433467;179433466;179433465 |
Novex-2 | 16925 | 50998;50999;51000 | chr2:178568740;178568739;178568738 | chr2:179433467;179433466;179433465 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/T | rs1246528312 | -1.691 | 0.999 | D | 0.734 | 0.584 | 0.653491938199 | gnomAD-2.1.1 | 4.04E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 0 | 1.67168E-04 |
P/T | rs1246528312 | -1.691 | 0.999 | D | 0.734 | 0.584 | 0.653491938199 | gnomAD-4.0.0 | 1.59289E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 3.02608E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.6127 | likely_pathogenic | 0.5531 | ambiguous | -1.663 | Destabilizing | 0.767 | D | 0.363 | neutral | D | 0.529716107 | None | None | N |
P/C | 0.9771 | likely_pathogenic | 0.9724 | pathogenic | -1.29 | Destabilizing | 1.0 | D | 0.804 | deleterious | None | None | None | None | N |
P/D | 0.9978 | likely_pathogenic | 0.9977 | pathogenic | -1.925 | Destabilizing | 1.0 | D | 0.789 | deleterious | None | None | None | None | N |
P/E | 0.9956 | likely_pathogenic | 0.9952 | pathogenic | -1.938 | Destabilizing | 1.0 | D | 0.77 | deleterious | None | None | None | None | N |
P/F | 0.9986 | likely_pathogenic | 0.9981 | pathogenic | -1.428 | Destabilizing | 1.0 | D | 0.815 | deleterious | None | None | None | None | N |
P/G | 0.9567 | likely_pathogenic | 0.954 | pathogenic | -1.957 | Destabilizing | 0.997 | D | 0.674 | neutral | None | None | None | None | N |
P/H | 0.9954 | likely_pathogenic | 0.9946 | pathogenic | -1.406 | Destabilizing | 1.0 | D | 0.795 | deleterious | None | None | None | None | N |
P/I | 0.9841 | likely_pathogenic | 0.9761 | pathogenic | -0.951 | Destabilizing | 1.0 | D | 0.793 | deleterious | None | None | None | None | N |
P/K | 0.997 | likely_pathogenic | 0.9967 | pathogenic | -1.285 | Destabilizing | 1.0 | D | 0.78 | deleterious | None | None | None | None | N |
P/L | 0.9312 | likely_pathogenic | 0.9098 | pathogenic | -0.951 | Destabilizing | 0.999 | D | 0.749 | deleterious | D | 0.530476576 | None | None | N |
P/M | 0.9847 | likely_pathogenic | 0.9802 | pathogenic | -0.78 | Destabilizing | 1.0 | D | 0.797 | deleterious | None | None | None | None | N |
P/N | 0.9958 | likely_pathogenic | 0.9951 | pathogenic | -1.142 | Destabilizing | 1.0 | D | 0.795 | deleterious | None | None | None | None | N |
P/Q | 0.9925 | likely_pathogenic | 0.9913 | pathogenic | -1.398 | Destabilizing | 1.0 | D | 0.807 | deleterious | D | 0.529716107 | None | None | N |
P/R | 0.992 | likely_pathogenic | 0.9905 | pathogenic | -0.713 | Destabilizing | 0.999 | D | 0.792 | deleterious | D | 0.529969597 | None | None | N |
P/S | 0.9598 | likely_pathogenic | 0.9547 | pathogenic | -1.624 | Destabilizing | 0.998 | D | 0.715 | prob.delet. | D | 0.529462618 | None | None | N |
P/T | 0.943 | likely_pathogenic | 0.93 | pathogenic | -1.538 | Destabilizing | 0.999 | D | 0.734 | prob.delet. | D | 0.529969597 | None | None | N |
P/V | 0.9443 | likely_pathogenic | 0.923 | pathogenic | -1.156 | Destabilizing | 0.999 | D | 0.707 | prob.neutral | None | None | None | None | N |
P/W | 0.9994 | likely_pathogenic | 0.9993 | pathogenic | -1.568 | Destabilizing | 1.0 | D | 0.794 | deleterious | None | None | None | None | N |
P/Y | 0.9984 | likely_pathogenic | 0.998 | pathogenic | -1.285 | Destabilizing | 1.0 | D | 0.813 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.