Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 25801 | 77626;77627;77628 | chr2:178568731;178568730;178568729 | chr2:179433458;179433457;179433456 |
N2AB | 24160 | 72703;72704;72705 | chr2:178568731;178568730;178568729 | chr2:179433458;179433457;179433456 |
N2A | 23233 | 69922;69923;69924 | chr2:178568731;178568730;178568729 | chr2:179433458;179433457;179433456 |
N2B | 16736 | 50431;50432;50433 | chr2:178568731;178568730;178568729 | chr2:179433458;179433457;179433456 |
Novex-1 | 16861 | 50806;50807;50808 | chr2:178568731;178568730;178568729 | chr2:179433458;179433457;179433456 |
Novex-2 | 16928 | 51007;51008;51009 | chr2:178568731;178568730;178568729 | chr2:179433458;179433457;179433456 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/T | None | None | 0.117 | N | 0.339 | 0.063 | 0.235038932564 | gnomAD-4.0.0 | 1.5926E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.43373E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.35 | ambiguous | 0.3829 | ambiguous | -0.049 | Destabilizing | 0.067 | N | 0.359 | neutral | None | None | None | None | N |
K/C | 0.4245 | ambiguous | 0.4824 | ambiguous | -0.288 | Destabilizing | 0.935 | D | 0.357 | neutral | None | None | None | None | N |
K/D | 0.5995 | likely_pathogenic | 0.6379 | pathogenic | -0.098 | Destabilizing | 0.149 | N | 0.351 | neutral | None | None | None | None | N |
K/E | 0.2236 | likely_benign | 0.2409 | benign | -0.048 | Destabilizing | 0.027 | N | 0.376 | neutral | N | 0.506136728 | None | None | N |
K/F | 0.5961 | likely_pathogenic | 0.6329 | pathogenic | -0.009 | Destabilizing | 0.555 | D | 0.342 | neutral | None | None | None | None | N |
K/G | 0.45 | ambiguous | 0.494 | ambiguous | -0.316 | Destabilizing | 0.149 | N | 0.358 | neutral | None | None | None | None | N |
K/H | 0.1692 | likely_benign | 0.1908 | benign | -0.569 | Destabilizing | 0.555 | D | 0.349 | neutral | None | None | None | None | N |
K/I | 0.2544 | likely_benign | 0.2732 | benign | 0.597 | Stabilizing | 0.484 | N | 0.357 | neutral | N | 0.504984722 | None | None | N |
K/L | 0.2664 | likely_benign | 0.2898 | benign | 0.597 | Stabilizing | 0.149 | N | 0.358 | neutral | None | None | None | None | N |
K/M | 0.2154 | likely_benign | 0.2264 | benign | 0.195 | Stabilizing | 0.791 | D | 0.353 | neutral | None | None | None | None | N |
K/N | 0.3993 | ambiguous | 0.4006 | ambiguous | -0.038 | Destabilizing | 0.117 | N | 0.33 | neutral | N | 0.4780161 | None | None | N |
K/P | 0.7451 | likely_pathogenic | 0.7733 | pathogenic | 0.411 | Stabilizing | 0.555 | D | 0.377 | neutral | None | None | None | None | N |
K/Q | 0.1095 | likely_benign | 0.1144 | benign | -0.122 | Destabilizing | 0.062 | N | 0.347 | neutral | N | 0.496133165 | None | None | N |
K/R | 0.0627 | likely_benign | 0.0647 | benign | -0.261 | Destabilizing | None | N | 0.151 | neutral | N | 0.415093436 | None | None | N |
K/S | 0.3871 | ambiguous | 0.4236 | ambiguous | -0.48 | Destabilizing | 0.149 | N | 0.327 | neutral | None | None | None | None | N |
K/T | 0.1747 | likely_benign | 0.1894 | benign | -0.264 | Destabilizing | 0.117 | N | 0.339 | neutral | N | 0.493978294 | None | None | N |
K/V | 0.2482 | likely_benign | 0.275 | benign | 0.411 | Stabilizing | 0.149 | N | 0.349 | neutral | None | None | None | None | N |
K/W | 0.4752 | ambiguous | 0.5267 | ambiguous | -0.03 | Destabilizing | 0.935 | D | 0.419 | neutral | None | None | None | None | N |
K/Y | 0.4476 | ambiguous | 0.478 | ambiguous | 0.29 | Stabilizing | 0.555 | D | 0.346 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.