Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 25807 | 77644;77645;77646 | chr2:178568713;178568712;178568711 | chr2:179433440;179433439;179433438 |
N2AB | 24166 | 72721;72722;72723 | chr2:178568713;178568712;178568711 | chr2:179433440;179433439;179433438 |
N2A | 23239 | 69940;69941;69942 | chr2:178568713;178568712;178568711 | chr2:179433440;179433439;179433438 |
N2B | 16742 | 50449;50450;50451 | chr2:178568713;178568712;178568711 | chr2:179433440;179433439;179433438 |
Novex-1 | 16867 | 50824;50825;50826 | chr2:178568713;178568712;178568711 | chr2:179433440;179433439;179433438 |
Novex-2 | 16934 | 51025;51026;51027 | chr2:178568713;178568712;178568711 | chr2:179433440;179433439;179433438 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/C | rs774704941 | -0.97 | 0.999 | N | 0.611 | 0.47 | 0.645716986391 | gnomAD-2.1.1 | 4.04E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.95E-06 | 0 |
Y/C | rs774704941 | -0.97 | 0.999 | N | 0.611 | 0.47 | 0.645716986391 | gnomAD-4.0.0 | 1.59231E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85977E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/A | 0.8003 | likely_pathogenic | 0.8239 | pathogenic | -1.813 | Destabilizing | 0.916 | D | 0.49 | neutral | None | None | None | None | N |
Y/C | 0.2086 | likely_benign | 0.2338 | benign | -1.31 | Destabilizing | 0.999 | D | 0.611 | neutral | N | 0.491377549 | None | None | N |
Y/D | 0.9002 | likely_pathogenic | 0.9156 | pathogenic | -0.408 | Destabilizing | 0.983 | D | 0.637 | neutral | N | 0.52083811 | None | None | N |
Y/E | 0.9574 | likely_pathogenic | 0.9639 | pathogenic | -0.239 | Destabilizing | 0.975 | D | 0.595 | neutral | None | None | None | None | N |
Y/F | 0.0858 | likely_benign | 0.0849 | benign | -0.489 | Destabilizing | 0.981 | D | 0.443 | neutral | N | 0.47091222 | None | None | N |
Y/G | 0.8561 | likely_pathogenic | 0.8745 | pathogenic | -2.168 | Highly Destabilizing | 0.975 | D | 0.581 | neutral | None | None | None | None | N |
Y/H | 0.4024 | ambiguous | 0.478 | ambiguous | -0.742 | Destabilizing | 0.994 | D | 0.521 | neutral | D | 0.532750113 | None | None | N |
Y/I | 0.5132 | ambiguous | 0.5467 | ambiguous | -0.714 | Destabilizing | 0.987 | D | 0.587 | neutral | None | None | None | None | N |
Y/K | 0.9077 | likely_pathogenic | 0.9288 | pathogenic | -1.199 | Destabilizing | 0.975 | D | 0.607 | neutral | None | None | None | None | N |
Y/L | 0.5767 | likely_pathogenic | 0.5936 | pathogenic | -0.714 | Destabilizing | 0.916 | D | 0.522 | neutral | None | None | None | None | N |
Y/M | 0.7297 | likely_pathogenic | 0.7454 | pathogenic | -0.81 | Destabilizing | 0.999 | D | 0.547 | neutral | None | None | None | None | N |
Y/N | 0.6952 | likely_pathogenic | 0.7353 | pathogenic | -1.783 | Destabilizing | 0.983 | D | 0.613 | neutral | N | 0.49112406 | None | None | N |
Y/P | 0.9839 | likely_pathogenic | 0.9866 | pathogenic | -1.08 | Destabilizing | 0.033 | N | 0.393 | neutral | None | None | None | None | N |
Y/Q | 0.8425 | likely_pathogenic | 0.8771 | pathogenic | -1.45 | Destabilizing | 0.987 | D | 0.582 | neutral | None | None | None | None | N |
Y/R | 0.8065 | likely_pathogenic | 0.8488 | pathogenic | -1.166 | Destabilizing | 0.987 | D | 0.615 | neutral | None | None | None | None | N |
Y/S | 0.6123 | likely_pathogenic | 0.6551 | pathogenic | -2.404 | Highly Destabilizing | 0.967 | D | 0.554 | neutral | N | 0.481716311 | None | None | N |
Y/T | 0.7394 | likely_pathogenic | 0.7605 | pathogenic | -2.119 | Highly Destabilizing | 0.975 | D | 0.577 | neutral | None | None | None | None | N |
Y/V | 0.445 | ambiguous | 0.4685 | ambiguous | -1.08 | Destabilizing | 0.957 | D | 0.535 | neutral | None | None | None | None | N |
Y/W | 0.4595 | ambiguous | 0.4735 | ambiguous | 0.012 | Stabilizing | 0.999 | D | 0.489 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.