Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 25814 | 77665;77666;77667 | chr2:178568692;178568691;178568690 | chr2:179433419;179433418;179433417 |
N2AB | 24173 | 72742;72743;72744 | chr2:178568692;178568691;178568690 | chr2:179433419;179433418;179433417 |
N2A | 23246 | 69961;69962;69963 | chr2:178568692;178568691;178568690 | chr2:179433419;179433418;179433417 |
N2B | 16749 | 50470;50471;50472 | chr2:178568692;178568691;178568690 | chr2:179433419;179433418;179433417 |
Novex-1 | 16874 | 50845;50846;50847 | chr2:178568692;178568691;178568690 | chr2:179433419;179433418;179433417 |
Novex-2 | 16941 | 51046;51047;51048 | chr2:178568692;178568691;178568690 | chr2:179433419;179433418;179433417 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/Y | rs1432951481 | -0.084 | 0.999 | N | 0.723 | 0.35 | 0.264547087235 | gnomAD-2.1.1 | 3.19E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 6.48E-05 | 0 |
D/Y | rs1432951481 | -0.084 | 0.999 | N | 0.723 | 0.35 | 0.264547087235 | gnomAD-4.0.0 | 5.47519E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 7.19686E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/A | 0.3829 | ambiguous | 0.3915 | ambiguous | -0.391 | Destabilizing | 0.988 | D | 0.655 | neutral | N | 0.504655782 | None | None | N |
D/C | 0.8219 | likely_pathogenic | 0.8306 | pathogenic | 0.009 | Stabilizing | 1.0 | D | 0.745 | deleterious | None | None | None | None | N |
D/E | 0.3291 | likely_benign | 0.3325 | benign | -0.48 | Destabilizing | 0.958 | D | 0.475 | neutral | N | 0.501095402 | None | None | N |
D/F | 0.7987 | likely_pathogenic | 0.8018 | pathogenic | -0.351 | Destabilizing | 1.0 | D | 0.726 | prob.delet. | None | None | None | None | N |
D/G | 0.393 | ambiguous | 0.3959 | ambiguous | -0.645 | Destabilizing | 0.919 | D | 0.66 | neutral | N | 0.483697871 | None | None | N |
D/H | 0.5455 | ambiguous | 0.5658 | pathogenic | -0.544 | Destabilizing | 0.998 | D | 0.697 | prob.neutral | N | 0.466354084 | None | None | N |
D/I | 0.6108 | likely_pathogenic | 0.6269 | pathogenic | 0.245 | Stabilizing | 0.995 | D | 0.747 | deleterious | None | None | None | None | N |
D/K | 0.7659 | likely_pathogenic | 0.7732 | pathogenic | 0.008 | Stabilizing | 0.991 | D | 0.675 | prob.neutral | None | None | None | None | N |
D/L | 0.6344 | likely_pathogenic | 0.6391 | pathogenic | 0.245 | Stabilizing | 0.995 | D | 0.721 | prob.delet. | None | None | None | None | N |
D/M | 0.8014 | likely_pathogenic | 0.8058 | pathogenic | 0.585 | Stabilizing | 1.0 | D | 0.725 | prob.delet. | None | None | None | None | N |
D/N | 0.1462 | likely_benign | 0.1471 | benign | -0.274 | Destabilizing | 0.142 | N | 0.352 | neutral | N | 0.478026541 | None | None | N |
D/P | 0.6667 | likely_pathogenic | 0.676 | pathogenic | 0.057 | Stabilizing | 0.998 | D | 0.701 | prob.neutral | None | None | None | None | N |
D/Q | 0.6488 | likely_pathogenic | 0.6556 | pathogenic | -0.215 | Destabilizing | 0.991 | D | 0.698 | prob.neutral | None | None | None | None | N |
D/R | 0.8013 | likely_pathogenic | 0.8101 | pathogenic | 0.088 | Stabilizing | 0.991 | D | 0.71 | prob.delet. | None | None | None | None | N |
D/S | 0.258 | likely_benign | 0.2647 | benign | -0.431 | Destabilizing | 0.938 | D | 0.654 | neutral | None | None | None | None | N |
D/T | 0.4178 | ambiguous | 0.4325 | ambiguous | -0.234 | Destabilizing | 0.991 | D | 0.684 | prob.neutral | None | None | None | None | N |
D/V | 0.4207 | ambiguous | 0.43 | ambiguous | 0.057 | Stabilizing | 0.994 | D | 0.72 | prob.delet. | N | 0.490014403 | None | None | N |
D/W | 0.9653 | likely_pathogenic | 0.966 | pathogenic | -0.242 | Destabilizing | 1.0 | D | 0.747 | deleterious | None | None | None | None | N |
D/Y | 0.4022 | ambiguous | 0.4078 | ambiguous | -0.131 | Destabilizing | 0.999 | D | 0.723 | prob.delet. | N | 0.468329094 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.