Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 25821 | 77686;77687;77688 | chr2:178568671;178568670;178568669 | chr2:179433398;179433397;179433396 |
N2AB | 24180 | 72763;72764;72765 | chr2:178568671;178568670;178568669 | chr2:179433398;179433397;179433396 |
N2A | 23253 | 69982;69983;69984 | chr2:178568671;178568670;178568669 | chr2:179433398;179433397;179433396 |
N2B | 16756 | 50491;50492;50493 | chr2:178568671;178568670;178568669 | chr2:179433398;179433397;179433396 |
Novex-1 | 16881 | 50866;50867;50868 | chr2:178568671;178568670;178568669 | chr2:179433398;179433397;179433396 |
Novex-2 | 16948 | 51067;51068;51069 | chr2:178568671;178568670;178568669 | chr2:179433398;179433397;179433396 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/L | None | None | 0.084 | N | 0.49 | 0.149 | 0.312306559268 | gnomAD-4.0.0 | 1.59212E-06 | None | None | None | None | N | None | 5.66059E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.5711 | likely_pathogenic | 0.6123 | pathogenic | -2.453 | Highly Destabilizing | 0.404 | N | 0.708 | prob.delet. | None | None | None | None | N |
I/C | 0.6953 | likely_pathogenic | 0.7072 | pathogenic | -1.902 | Destabilizing | 0.973 | D | 0.767 | deleterious | None | None | None | None | N |
I/D | 0.9832 | likely_pathogenic | 0.9866 | pathogenic | -2.563 | Highly Destabilizing | 0.967 | D | 0.839 | deleterious | None | None | None | None | N |
I/E | 0.9609 | likely_pathogenic | 0.9641 | pathogenic | -2.461 | Highly Destabilizing | 0.906 | D | 0.829 | deleterious | None | None | None | None | N |
I/F | 0.14 | likely_benign | 0.147 | benign | -1.683 | Destabilizing | 0.642 | D | 0.73 | prob.delet. | N | 0.437325296 | None | None | N |
I/G | 0.8879 | likely_pathogenic | 0.9097 | pathogenic | -2.897 | Highly Destabilizing | 0.906 | D | 0.823 | deleterious | None | None | None | None | N |
I/H | 0.806 | likely_pathogenic | 0.8214 | pathogenic | -2.184 | Highly Destabilizing | 0.947 | D | 0.837 | deleterious | None | None | None | None | N |
I/K | 0.8528 | likely_pathogenic | 0.8533 | pathogenic | -1.892 | Destabilizing | 0.906 | D | 0.829 | deleterious | None | None | None | None | N |
I/L | 0.1454 | likely_benign | 0.1519 | benign | -1.228 | Destabilizing | 0.084 | N | 0.49 | neutral | N | 0.515650006 | None | None | N |
I/M | 0.1746 | likely_benign | 0.1813 | benign | -1.09 | Destabilizing | 0.782 | D | 0.695 | prob.neutral | D | 0.525213565 | None | None | N |
I/N | 0.82 | likely_pathogenic | 0.8385 | pathogenic | -1.953 | Destabilizing | 0.879 | D | 0.834 | deleterious | N | 0.514199654 | None | None | N |
I/P | 0.9652 | likely_pathogenic | 0.9724 | pathogenic | -1.612 | Destabilizing | 0.967 | D | 0.84 | deleterious | None | None | None | None | N |
I/Q | 0.8677 | likely_pathogenic | 0.8767 | pathogenic | -2.033 | Highly Destabilizing | 0.906 | D | 0.83 | deleterious | None | None | None | None | N |
I/R | 0.7639 | likely_pathogenic | 0.771 | pathogenic | -1.342 | Destabilizing | 0.906 | D | 0.827 | deleterious | None | None | None | None | N |
I/S | 0.7015 | likely_pathogenic | 0.7264 | pathogenic | -2.631 | Highly Destabilizing | 0.782 | D | 0.791 | deleterious | D | 0.523866845 | None | None | N |
I/T | 0.5711 | likely_pathogenic | 0.6007 | pathogenic | -2.398 | Highly Destabilizing | 0.505 | D | 0.754 | deleterious | D | 0.534678484 | None | None | N |
I/V | 0.0567 | likely_benign | 0.0593 | benign | -1.612 | Destabilizing | 0.001 | N | 0.223 | neutral | N | 0.408201962 | None | None | N |
I/W | 0.882 | likely_pathogenic | 0.889 | pathogenic | -1.908 | Destabilizing | 0.973 | D | 0.832 | deleterious | None | None | None | None | N |
I/Y | 0.5664 | likely_pathogenic | 0.5798 | pathogenic | -1.679 | Destabilizing | 0.01 | N | 0.503 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.