Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 25822 | 77689;77690;77691 | chr2:178568668;178568667;178568666 | chr2:179433395;179433394;179433393 |
N2AB | 24181 | 72766;72767;72768 | chr2:178568668;178568667;178568666 | chr2:179433395;179433394;179433393 |
N2A | 23254 | 69985;69986;69987 | chr2:178568668;178568667;178568666 | chr2:179433395;179433394;179433393 |
N2B | 16757 | 50494;50495;50496 | chr2:178568668;178568667;178568666 | chr2:179433395;179433394;179433393 |
Novex-1 | 16882 | 50869;50870;50871 | chr2:178568668;178568667;178568666 | chr2:179433395;179433394;179433393 |
Novex-2 | 16949 | 51070;51071;51072 | chr2:178568668;178568667;178568666 | chr2:179433395;179433394;179433393 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/P | None | None | 0.896 | N | 0.354 | 0.443 | 0.32082282376 | gnomAD-4.0.0 | 1.59211E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85956E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.0624 | likely_benign | 0.0674 | benign | -0.416 | Destabilizing | 0.001 | N | 0.079 | neutral | N | 0.498061536 | None | None | N |
S/C | 0.0854 | likely_benign | 0.0903 | benign | -0.314 | Destabilizing | 0.97 | D | 0.29 | neutral | D | 0.532375907 | None | None | N |
S/D | 0.4231 | ambiguous | 0.4608 | ambiguous | 0.007 | Stabilizing | 0.617 | D | 0.297 | neutral | None | None | None | None | N |
S/E | 0.4255 | ambiguous | 0.4882 | ambiguous | -0.044 | Destabilizing | 0.447 | N | 0.233 | neutral | None | None | None | None | N |
S/F | 0.116 | likely_benign | 0.1135 | benign | -0.771 | Destabilizing | 0.681 | D | 0.399 | neutral | D | 0.533926336 | None | None | N |
S/G | 0.0988 | likely_benign | 0.1019 | benign | -0.608 | Destabilizing | 0.25 | N | 0.307 | neutral | None | None | None | None | N |
S/H | 0.2359 | likely_benign | 0.253 | benign | -1.136 | Destabilizing | 0.92 | D | 0.308 | neutral | None | None | None | None | N |
S/I | 0.1023 | likely_benign | 0.1055 | benign | -0.033 | Destabilizing | 0.85 | D | 0.392 | neutral | None | None | None | None | N |
S/K | 0.4248 | ambiguous | 0.473 | ambiguous | -0.636 | Destabilizing | 0.005 | N | 0.094 | neutral | None | None | None | None | N |
S/L | 0.0703 | likely_benign | 0.072 | benign | -0.033 | Destabilizing | 0.447 | N | 0.361 | neutral | None | None | None | None | N |
S/M | 0.1218 | likely_benign | 0.1269 | benign | 0.147 | Stabilizing | 0.972 | D | 0.299 | neutral | None | None | None | None | N |
S/N | 0.1392 | likely_benign | 0.1393 | benign | -0.411 | Destabilizing | 0.617 | D | 0.329 | neutral | None | None | None | None | N |
S/P | 0.7723 | likely_pathogenic | 0.8253 | pathogenic | -0.128 | Destabilizing | 0.896 | D | 0.354 | neutral | N | 0.513764673 | None | None | N |
S/Q | 0.3342 | likely_benign | 0.3766 | ambiguous | -0.591 | Destabilizing | 0.85 | D | 0.327 | neutral | None | None | None | None | N |
S/R | 0.3439 | ambiguous | 0.3749 | ambiguous | -0.488 | Destabilizing | 0.447 | N | 0.329 | neutral | None | None | None | None | N |
S/T | 0.066 | likely_benign | 0.066 | benign | -0.448 | Destabilizing | 0.334 | N | 0.303 | neutral | N | 0.489113979 | None | None | N |
S/V | 0.1065 | likely_benign | 0.1162 | benign | -0.128 | Destabilizing | 0.447 | N | 0.347 | neutral | None | None | None | None | N |
S/W | 0.2311 | likely_benign | 0.2477 | benign | -0.787 | Destabilizing | 0.992 | D | 0.414 | neutral | None | None | None | None | N |
S/Y | 0.1286 | likely_benign | 0.1309 | benign | -0.515 | Destabilizing | 0.016 | N | 0.276 | neutral | N | 0.499775021 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.