Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 25824 | 77695;77696;77697 | chr2:178568662;178568661;178568660 | chr2:179433389;179433388;179433387 |
N2AB | 24183 | 72772;72773;72774 | chr2:178568662;178568661;178568660 | chr2:179433389;179433388;179433387 |
N2A | 23256 | 69991;69992;69993 | chr2:178568662;178568661;178568660 | chr2:179433389;179433388;179433387 |
N2B | 16759 | 50500;50501;50502 | chr2:178568662;178568661;178568660 | chr2:179433389;179433388;179433387 |
Novex-1 | 16884 | 50875;50876;50877 | chr2:178568662;178568661;178568660 | chr2:179433389;179433388;179433387 |
Novex-2 | 16951 | 51076;51077;51078 | chr2:178568662;178568661;178568660 | chr2:179433389;179433388;179433387 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/C | rs778684474 | -0.137 | 0.999 | D | 0.524 | 0.501 | 0.732132420435 | gnomAD-2.1.1 | 2.02E-05 | None | None | None | None | I | None | 0 | 0 | None | 0 | 5.59E-05 | None | 6.54E-05 | None | 0 | 1.79E-05 | 0 |
R/C | rs778684474 | -0.137 | 0.999 | D | 0.524 | 0.501 | 0.732132420435 | gnomAD-4.0.0 | 2.19E-05 | None | None | None | None | I | None | 0 | 0 | None | 0 | 5.04566E-05 | None | 0 | 0 | 1.07954E-05 | 1.85567E-04 | 3.31433E-05 |
R/H | rs376051922 | -0.542 | 0.016 | N | 0.261 | 0.1 | None | gnomAD-2.1.1 | 2.51E-05 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 5.5E-05 | 0 |
R/H | rs376051922 | -0.542 | 0.016 | N | 0.261 | 0.1 | None | gnomAD-3.1.2 | 3.95E-05 | None | None | None | None | I | None | 2.41E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 7.36E-05 | 0 | 0 |
R/H | rs376051922 | -0.542 | 0.016 | N | 0.261 | 0.1 | None | gnomAD-4.0.0 | 4.40115E-05 | None | None | None | None | I | None | 1.3359E-05 | 0 | None | 0 | 2.23184E-05 | None | 0 | 0 | 5.68009E-05 | 1.09823E-05 | 1.60169E-05 |
R/L | rs376051922 | 0.37 | 0.846 | D | 0.575 | 0.325 | 0.587417723555 | gnomAD-2.1.1 | 3.19E-05 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 6.48E-05 | 0 |
R/L | rs376051922 | 0.37 | 0.846 | D | 0.575 | 0.325 | 0.587417723555 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | I | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
R/L | rs376051922 | 0.37 | 0.846 | D | 0.575 | 0.325 | 0.587417723555 | gnomAD-4.0.0 | 1.23976E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 1.56265E-05 | 0 | 8.47775E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/A | 0.8904 | likely_pathogenic | 0.8808 | pathogenic | 0.098 | Stabilizing | 0.373 | N | 0.515 | neutral | None | None | None | None | I |
R/C | 0.3048 | likely_benign | 0.2669 | benign | -0.117 | Destabilizing | 0.999 | D | 0.524 | neutral | D | 0.525713182 | None | None | I |
R/D | 0.973 | likely_pathogenic | 0.9743 | pathogenic | -0.146 | Destabilizing | 0.742 | D | 0.581 | neutral | None | None | None | None | I |
R/E | 0.8468 | likely_pathogenic | 0.8395 | pathogenic | -0.078 | Destabilizing | 0.373 | N | 0.441 | neutral | None | None | None | None | I |
R/F | 0.7867 | likely_pathogenic | 0.772 | pathogenic | -0.114 | Destabilizing | 0.953 | D | 0.521 | neutral | None | None | None | None | I |
R/G | 0.8646 | likely_pathogenic | 0.8521 | pathogenic | -0.095 | Destabilizing | 0.846 | D | 0.583 | neutral | N | 0.495999132 | None | None | I |
R/H | 0.1834 | likely_benign | 0.161 | benign | -0.623 | Destabilizing | 0.016 | N | 0.261 | neutral | N | 0.468181346 | None | None | I |
R/I | 0.5107 | ambiguous | 0.5002 | ambiguous | 0.57 | Stabilizing | 0.953 | D | 0.532 | neutral | None | None | None | None | I |
R/K | 0.1919 | likely_benign | 0.1807 | benign | -0.023 | Destabilizing | 0.004 | N | 0.267 | neutral | None | None | None | None | I |
R/L | 0.5462 | ambiguous | 0.5349 | ambiguous | 0.57 | Stabilizing | 0.846 | D | 0.575 | neutral | D | 0.52413063 | None | None | I |
R/M | 0.6347 | likely_pathogenic | 0.609 | pathogenic | 0.058 | Stabilizing | 0.984 | D | 0.53 | neutral | None | None | None | None | I |
R/N | 0.8941 | likely_pathogenic | 0.8945 | pathogenic | 0.13 | Stabilizing | 0.742 | D | 0.474 | neutral | None | None | None | None | I |
R/P | 0.9889 | likely_pathogenic | 0.9904 | pathogenic | 0.433 | Stabilizing | 0.975 | D | 0.562 | neutral | N | 0.507608927 | None | None | I |
R/Q | 0.2219 | likely_benign | 0.2028 | benign | 0.077 | Stabilizing | 0.742 | D | 0.53 | neutral | None | None | None | None | I |
R/S | 0.8951 | likely_pathogenic | 0.8836 | pathogenic | -0.135 | Destabilizing | 0.846 | D | 0.552 | neutral | N | 0.501368413 | None | None | I |
R/T | 0.7771 | likely_pathogenic | 0.7628 | pathogenic | 0.064 | Stabilizing | 0.742 | D | 0.59 | neutral | None | None | None | None | I |
R/V | 0.6708 | likely_pathogenic | 0.6615 | pathogenic | 0.433 | Stabilizing | 0.91 | D | 0.539 | neutral | None | None | None | None | I |
R/W | 0.3923 | ambiguous | 0.3692 | ambiguous | -0.219 | Destabilizing | 0.996 | D | 0.545 | neutral | None | None | None | None | I |
R/Y | 0.5564 | ambiguous | 0.5336 | ambiguous | 0.196 | Stabilizing | 0.91 | D | 0.565 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.