Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 25839 | 77740;77741;77742 | chr2:178568617;178568616;178568615 | chr2:179433344;179433343;179433342 |
N2AB | 24198 | 72817;72818;72819 | chr2:178568617;178568616;178568615 | chr2:179433344;179433343;179433342 |
N2A | 23271 | 70036;70037;70038 | chr2:178568617;178568616;178568615 | chr2:179433344;179433343;179433342 |
N2B | 16774 | 50545;50546;50547 | chr2:178568617;178568616;178568615 | chr2:179433344;179433343;179433342 |
Novex-1 | 16899 | 50920;50921;50922 | chr2:178568617;178568616;178568615 | chr2:179433344;179433343;179433342 |
Novex-2 | 16966 | 51121;51122;51123 | chr2:178568617;178568616;178568615 | chr2:179433344;179433343;179433342 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/Q | rs1371831965 | None | 0.993 | N | 0.631 | 0.384 | 0.358948522604 | gnomAD-4.0.0 | 6.8435E-06 | None | None | None | None | N | None | 2.98972E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 8.09666E-06 | 0 | 0 |
K/R | None | None | 0.235 | N | 0.339 | 0.143 | 0.396044805602 | gnomAD-4.0.0 | 2.05306E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99632E-07 | 0 | 3.31411E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.7278 | likely_pathogenic | 0.7302 | pathogenic | 0.032 | Stabilizing | 0.983 | D | 0.619 | neutral | None | None | None | None | N |
K/C | 0.8357 | likely_pathogenic | 0.84 | pathogenic | -0.468 | Destabilizing | 1.0 | D | 0.713 | prob.delet. | None | None | None | None | N |
K/D | 0.931 | likely_pathogenic | 0.9296 | pathogenic | -0.246 | Destabilizing | 0.998 | D | 0.685 | prob.neutral | None | None | None | None | N |
K/E | 0.5943 | likely_pathogenic | 0.5835 | pathogenic | -0.238 | Destabilizing | 0.977 | D | 0.593 | neutral | N | 0.514684427 | None | None | N |
K/F | 0.9248 | likely_pathogenic | 0.9256 | pathogenic | -0.263 | Destabilizing | 1.0 | D | 0.697 | prob.neutral | None | None | None | None | N |
K/G | 0.8136 | likely_pathogenic | 0.8078 | pathogenic | -0.121 | Destabilizing | 0.998 | D | 0.583 | neutral | None | None | None | None | N |
K/H | 0.4605 | ambiguous | 0.463 | ambiguous | -0.233 | Destabilizing | 0.999 | D | 0.665 | neutral | None | None | None | None | N |
K/I | 0.6121 | likely_pathogenic | 0.6187 | pathogenic | 0.355 | Stabilizing | 0.998 | D | 0.71 | prob.delet. | None | None | None | None | N |
K/L | 0.5617 | ambiguous | 0.5756 | pathogenic | 0.355 | Stabilizing | 0.995 | D | 0.583 | neutral | None | None | None | None | N |
K/M | 0.529 | ambiguous | 0.5331 | ambiguous | -0.127 | Destabilizing | 1.0 | D | 0.665 | neutral | N | 0.491723625 | None | None | N |
K/N | 0.8344 | likely_pathogenic | 0.8325 | pathogenic | -0.062 | Destabilizing | 0.993 | D | 0.644 | neutral | N | 0.484465015 | None | None | N |
K/P | 0.8236 | likely_pathogenic | 0.8363 | pathogenic | 0.272 | Stabilizing | 0.999 | D | 0.666 | neutral | None | None | None | None | N |
K/Q | 0.2318 | likely_benign | 0.2323 | benign | -0.151 | Destabilizing | 0.993 | D | 0.631 | neutral | N | 0.483592869 | None | None | N |
K/R | 0.0842 | likely_benign | 0.0819 | benign | -0.12 | Destabilizing | 0.235 | N | 0.339 | neutral | N | 0.509027891 | None | None | N |
K/S | 0.8006 | likely_pathogenic | 0.8049 | pathogenic | -0.4 | Destabilizing | 0.983 | D | 0.604 | neutral | None | None | None | None | N |
K/T | 0.525 | ambiguous | 0.5315 | ambiguous | -0.265 | Destabilizing | 0.997 | D | 0.631 | neutral | N | 0.513953708 | None | None | N |
K/V | 0.5871 | likely_pathogenic | 0.5966 | pathogenic | 0.272 | Stabilizing | 0.998 | D | 0.683 | prob.neutral | None | None | None | None | N |
K/W | 0.8938 | likely_pathogenic | 0.8924 | pathogenic | -0.39 | Destabilizing | 1.0 | D | 0.725 | prob.delet. | None | None | None | None | N |
K/Y | 0.8393 | likely_pathogenic | 0.8415 | pathogenic | -0.029 | Destabilizing | 0.999 | D | 0.675 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.