Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 2584 | 7975;7976;7977 | chr2:178773214;178773213;178773212 | chr2:179637941;179637940;179637939 |
N2AB | 2584 | 7975;7976;7977 | chr2:178773214;178773213;178773212 | chr2:179637941;179637940;179637939 |
N2A | 2584 | 7975;7976;7977 | chr2:178773214;178773213;178773212 | chr2:179637941;179637940;179637939 |
N2B | 2538 | 7837;7838;7839 | chr2:178773214;178773213;178773212 | chr2:179637941;179637940;179637939 |
Novex-1 | 2538 | 7837;7838;7839 | chr2:178773214;178773213;178773212 | chr2:179637941;179637940;179637939 |
Novex-2 | 2538 | 7837;7838;7839 | chr2:178773214;178773213;178773212 | chr2:179637941;179637940;179637939 |
Novex-3 | 2584 | 7975;7976;7977 | chr2:178773214;178773213;178773212 | chr2:179637941;179637940;179637939 |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/E | None | None | 1.0 | N | 0.679 | 0.382 | 0.342631996419 | gnomAD-4.0.0 | 1.59125E-06 | None | None | None | None | N | None | 0 | 2.28896E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/A | 0.5536 | ambiguous | 0.5135 | ambiguous | -0.216 | Destabilizing | 1.0 | D | 0.522 | neutral | N | 0.461092022 | None | None | N |
G/C | 0.6817 | likely_pathogenic | 0.643 | pathogenic | -0.757 | Destabilizing | 1.0 | D | 0.752 | deleterious | None | None | None | None | N |
G/D | 0.3415 | ambiguous | 0.295 | benign | -0.104 | Destabilizing | 0.921 | D | 0.532 | neutral | None | None | None | None | N |
G/E | 0.5017 | ambiguous | 0.4329 | ambiguous | -0.226 | Destabilizing | 1.0 | D | 0.679 | prob.neutral | N | 0.47326425 | None | None | N |
G/F | 0.9655 | likely_pathogenic | 0.9591 | pathogenic | -0.739 | Destabilizing | 1.0 | D | 0.764 | deleterious | None | None | None | None | N |
G/H | 0.6969 | likely_pathogenic | 0.6755 | pathogenic | -0.481 | Destabilizing | 1.0 | D | 0.71 | prob.delet. | None | None | None | None | N |
G/I | 0.9414 | likely_pathogenic | 0.9287 | pathogenic | -0.185 | Destabilizing | 1.0 | D | 0.764 | deleterious | None | None | None | None | N |
G/K | 0.6916 | likely_pathogenic | 0.6445 | pathogenic | -0.687 | Destabilizing | 1.0 | D | 0.69 | prob.neutral | None | None | None | None | N |
G/L | 0.9164 | likely_pathogenic | 0.9039 | pathogenic | -0.185 | Destabilizing | 1.0 | D | 0.752 | deleterious | None | None | None | None | N |
G/M | 0.9452 | likely_pathogenic | 0.9333 | pathogenic | -0.388 | Destabilizing | 1.0 | D | 0.746 | deleterious | None | None | None | None | N |
G/N | 0.43 | ambiguous | 0.3992 | ambiguous | -0.347 | Destabilizing | 1.0 | D | 0.674 | neutral | None | None | None | None | N |
G/P | 0.982 | likely_pathogenic | 0.9807 | pathogenic | -0.158 | Destabilizing | 1.0 | D | 0.723 | prob.delet. | None | None | None | None | N |
G/Q | 0.5763 | likely_pathogenic | 0.5384 | ambiguous | -0.533 | Destabilizing | 1.0 | D | 0.731 | prob.delet. | None | None | None | None | N |
G/R | 0.5557 | ambiguous | 0.5079 | ambiguous | -0.362 | Destabilizing | 1.0 | D | 0.73 | prob.delet. | N | 0.461900665 | None | None | N |
G/S | 0.2204 | likely_benign | 0.2065 | benign | -0.591 | Destabilizing | 1.0 | D | 0.621 | neutral | None | None | None | None | N |
G/T | 0.7205 | likely_pathogenic | 0.6873 | pathogenic | -0.622 | Destabilizing | 1.0 | D | 0.685 | prob.neutral | None | None | None | None | N |
G/V | 0.8902 | likely_pathogenic | 0.8645 | pathogenic | -0.158 | Destabilizing | 1.0 | D | 0.755 | deleterious | D | 0.60164035 | None | None | N |
G/W | 0.8736 | likely_pathogenic | 0.8551 | pathogenic | -0.961 | Destabilizing | 1.0 | D | 0.731 | prob.delet. | None | None | None | None | N |
G/Y | 0.8879 | likely_pathogenic | 0.8718 | pathogenic | -0.571 | Destabilizing | 1.0 | D | 0.74 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.