Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 25842 | 77749;77750;77751 | chr2:178568608;178568607;178568606 | chr2:179433335;179433334;179433333 |
N2AB | 24201 | 72826;72827;72828 | chr2:178568608;178568607;178568606 | chr2:179433335;179433334;179433333 |
N2A | 23274 | 70045;70046;70047 | chr2:178568608;178568607;178568606 | chr2:179433335;179433334;179433333 |
N2B | 16777 | 50554;50555;50556 | chr2:178568608;178568607;178568606 | chr2:179433335;179433334;179433333 |
Novex-1 | 16902 | 50929;50930;50931 | chr2:178568608;178568607;178568606 | chr2:179433335;179433334;179433333 |
Novex-2 | 16969 | 51130;51131;51132 | chr2:178568608;178568607;178568606 | chr2:179433335;179433334;179433333 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | rs759436335 | -0.074 | 0.999 | N | 0.411 | 0.376 | 0.201204373187 | gnomAD-2.1.1 | 4.04E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 3.27E-05 | None | 0 | 0 | 0 |
T/A | rs759436335 | -0.074 | 0.999 | N | 0.411 | 0.376 | 0.201204373187 | gnomAD-4.0.0 | 1.59198E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.43328E-05 | 0 |
T/I | None | None | 1.0 | N | 0.565 | 0.394 | 0.31501682445 | gnomAD-4.0.0 | 1.59198E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85976E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.1646 | likely_benign | 0.1508 | benign | -0.107 | Destabilizing | 0.999 | D | 0.411 | neutral | N | 0.46792419 | None | None | N |
T/C | 0.8415 | likely_pathogenic | 0.8291 | pathogenic | -0.293 | Destabilizing | 1.0 | D | 0.604 | neutral | None | None | None | None | N |
T/D | 0.8085 | likely_pathogenic | 0.784 | pathogenic | 0.008 | Stabilizing | 1.0 | D | 0.574 | neutral | None | None | None | None | N |
T/E | 0.7202 | likely_pathogenic | 0.6894 | pathogenic | -0.082 | Destabilizing | 1.0 | D | 0.582 | neutral | None | None | None | None | N |
T/F | 0.7525 | likely_pathogenic | 0.7248 | pathogenic | -0.77 | Destabilizing | 1.0 | D | 0.639 | neutral | None | None | None | None | N |
T/G | 0.4725 | ambiguous | 0.4164 | ambiguous | -0.17 | Destabilizing | 1.0 | D | 0.565 | neutral | None | None | None | None | N |
T/H | 0.6832 | likely_pathogenic | 0.6384 | pathogenic | -0.335 | Destabilizing | 1.0 | D | 0.633 | neutral | None | None | None | None | N |
T/I | 0.5795 | likely_pathogenic | 0.5657 | pathogenic | -0.064 | Destabilizing | 1.0 | D | 0.565 | neutral | N | 0.470162291 | None | None | N |
T/K | 0.5995 | likely_pathogenic | 0.5717 | pathogenic | -0.242 | Destabilizing | 1.0 | D | 0.582 | neutral | N | 0.474927521 | None | None | N |
T/L | 0.2402 | likely_benign | 0.2272 | benign | -0.064 | Destabilizing | 0.999 | D | 0.5 | neutral | None | None | None | None | N |
T/M | 0.1749 | likely_benign | 0.1565 | benign | -0.11 | Destabilizing | 1.0 | D | 0.606 | neutral | None | None | None | None | N |
T/N | 0.3706 | ambiguous | 0.3132 | benign | -0.018 | Destabilizing | 1.0 | D | 0.613 | neutral | None | None | None | None | N |
T/P | 0.298 | likely_benign | 0.2867 | benign | -0.054 | Destabilizing | 1.0 | D | 0.569 | neutral | N | 0.469020269 | None | None | N |
T/Q | 0.5069 | ambiguous | 0.4549 | ambiguous | -0.224 | Destabilizing | 1.0 | D | 0.605 | neutral | None | None | None | None | N |
T/R | 0.5729 | likely_pathogenic | 0.5479 | ambiguous | 0.045 | Stabilizing | 1.0 | D | 0.577 | neutral | N | 0.49126241 | None | None | N |
T/S | 0.2006 | likely_benign | 0.1758 | benign | -0.174 | Destabilizing | 0.999 | D | 0.421 | neutral | N | 0.424151984 | None | None | N |
T/V | 0.3681 | ambiguous | 0.3497 | ambiguous | -0.054 | Destabilizing | 0.999 | D | 0.485 | neutral | None | None | None | None | N |
T/W | 0.9312 | likely_pathogenic | 0.9194 | pathogenic | -0.872 | Destabilizing | 1.0 | D | 0.657 | neutral | None | None | None | None | N |
T/Y | 0.7692 | likely_pathogenic | 0.7349 | pathogenic | -0.541 | Destabilizing | 1.0 | D | 0.632 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.