Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 2585 | 7978;7979;7980 | chr2:178773211;178773210;178773209 | chr2:179637938;179637937;179637936 |
N2AB | 2585 | 7978;7979;7980 | chr2:178773211;178773210;178773209 | chr2:179637938;179637937;179637936 |
N2A | 2585 | 7978;7979;7980 | chr2:178773211;178773210;178773209 | chr2:179637938;179637937;179637936 |
N2B | 2539 | 7840;7841;7842 | chr2:178773211;178773210;178773209 | chr2:179637938;179637937;179637936 |
Novex-1 | 2539 | 7840;7841;7842 | chr2:178773211;178773210;178773209 | chr2:179637938;179637937;179637936 |
Novex-2 | 2539 | 7840;7841;7842 | chr2:178773211;178773210;178773209 | chr2:179637938;179637937;179637936 |
Novex-3 | 2585 | 7978;7979;7980 | chr2:178773211;178773210;178773209 | chr2:179637938;179637937;179637936 |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/N | rs2091789577 | None | 0.982 | N | 0.661 | 0.296 | 0.27479166964 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 0 | 6.55E-05 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
K/N | rs2091789577 | None | 0.982 | N | 0.661 | 0.296 | 0.27479166964 | gnomAD-4.0.0 | 6.57177E-06 | None | None | None | None | N | None | 0 | 6.54622E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.5602 | ambiguous | 0.5274 | ambiguous | -0.667 | Destabilizing | 0.91 | D | 0.543 | neutral | None | None | None | None | N |
K/C | 0.7852 | likely_pathogenic | 0.7921 | pathogenic | -0.747 | Destabilizing | 0.999 | D | 0.717 | prob.delet. | None | None | None | None | N |
K/D | 0.5922 | likely_pathogenic | 0.5532 | ambiguous | 0.358 | Stabilizing | 0.986 | D | 0.636 | neutral | None | None | None | None | N |
K/E | 0.3203 | likely_benign | 0.2823 | benign | 0.493 | Stabilizing | 0.939 | D | 0.554 | neutral | D | 0.537986701 | None | None | N |
K/F | 0.8932 | likely_pathogenic | 0.8859 | pathogenic | -0.309 | Destabilizing | 0.993 | D | 0.739 | prob.delet. | None | None | None | None | N |
K/G | 0.5678 | likely_pathogenic | 0.5453 | ambiguous | -1.033 | Destabilizing | 0.986 | D | 0.676 | prob.neutral | None | None | None | None | N |
K/H | 0.4368 | ambiguous | 0.4492 | ambiguous | -1.15 | Destabilizing | 0.999 | D | 0.671 | neutral | None | None | None | None | N |
K/I | 0.6013 | likely_pathogenic | 0.5765 | pathogenic | 0.287 | Stabilizing | 0.982 | D | 0.743 | deleterious | D | 0.58616413 | None | None | N |
K/L | 0.5467 | ambiguous | 0.5282 | ambiguous | 0.287 | Stabilizing | 0.91 | D | 0.657 | neutral | None | None | None | None | N |
K/M | 0.3089 | likely_benign | 0.2947 | benign | 0.062 | Stabilizing | 0.999 | D | 0.671 | neutral | None | None | None | None | N |
K/N | 0.346 | ambiguous | 0.3122 | benign | -0.351 | Destabilizing | 0.982 | D | 0.661 | neutral | N | 0.508840444 | None | None | N |
K/P | 0.8034 | likely_pathogenic | 0.7902 | pathogenic | -0.001 | Destabilizing | 0.993 | D | 0.705 | prob.neutral | None | None | None | None | N |
K/Q | 0.2121 | likely_benign | 0.2066 | benign | -0.381 | Destabilizing | 0.991 | D | 0.701 | prob.neutral | N | 0.504035804 | None | None | N |
K/R | 0.1035 | likely_benign | 0.1061 | benign | -0.364 | Destabilizing | 0.939 | D | 0.525 | neutral | N | 0.511894355 | None | None | N |
K/S | 0.516 | ambiguous | 0.475 | ambiguous | -1.163 | Destabilizing | 0.91 | D | 0.561 | neutral | None | None | None | None | N |
K/T | 0.2217 | likely_benign | 0.2088 | benign | -0.805 | Destabilizing | 0.17 | N | 0.375 | neutral | N | 0.512643924 | None | None | N |
K/V | 0.5651 | likely_pathogenic | 0.5458 | ambiguous | -0.001 | Destabilizing | 0.973 | D | 0.673 | neutral | None | None | None | None | N |
K/W | 0.8874 | likely_pathogenic | 0.8887 | pathogenic | -0.12 | Destabilizing | 0.999 | D | 0.705 | prob.neutral | None | None | None | None | N |
K/Y | 0.7414 | likely_pathogenic | 0.7422 | pathogenic | 0.168 | Stabilizing | 0.998 | D | 0.726 | prob.delet. | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.