Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 25853 | 77782;77783;77784 | chr2:178568575;178568574;178568573 | chr2:179433302;179433301;179433300 |
N2AB | 24212 | 72859;72860;72861 | chr2:178568575;178568574;178568573 | chr2:179433302;179433301;179433300 |
N2A | 23285 | 70078;70079;70080 | chr2:178568575;178568574;178568573 | chr2:179433302;179433301;179433300 |
N2B | 16788 | 50587;50588;50589 | chr2:178568575;178568574;178568573 | chr2:179433302;179433301;179433300 |
Novex-1 | 16913 | 50962;50963;50964 | chr2:178568575;178568574;178568573 | chr2:179433302;179433301;179433300 |
Novex-2 | 16980 | 51163;51164;51165 | chr2:178568575;178568574;178568573 | chr2:179433302;179433301;179433300 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/N | None | None | 0.998 | N | 0.745 | 0.334 | 0.246773566709 | gnomAD-4.0.0 | 6.84332E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99607E-07 | 0 | 0 |
T/S | None | None | 0.979 | N | 0.615 | 0.28 | 0.170165803431 | gnomAD-4.0.0 | 6.84332E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.15961E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.1646 | likely_benign | 0.1634 | benign | -1.258 | Destabilizing | 0.958 | D | 0.615 | neutral | N | 0.485067156 | None | None | N |
T/C | 0.5096 | ambiguous | 0.5216 | ambiguous | -0.985 | Destabilizing | 1.0 | D | 0.795 | deleterious | None | None | None | None | N |
T/D | 0.9758 | likely_pathogenic | 0.9759 | pathogenic | -1.991 | Destabilizing | 0.998 | D | 0.763 | deleterious | None | None | None | None | N |
T/E | 0.9712 | likely_pathogenic | 0.9703 | pathogenic | -1.701 | Destabilizing | 0.998 | D | 0.755 | deleterious | None | None | None | None | N |
T/F | 0.8519 | likely_pathogenic | 0.8529 | pathogenic | -0.977 | Destabilizing | 0.991 | D | 0.821 | deleterious | None | None | None | None | N |
T/G | 0.6804 | likely_pathogenic | 0.6929 | pathogenic | -1.715 | Destabilizing | 0.995 | D | 0.763 | deleterious | None | None | None | None | N |
T/H | 0.8793 | likely_pathogenic | 0.8815 | pathogenic | -1.795 | Destabilizing | 1.0 | D | 0.823 | deleterious | None | None | None | None | N |
T/I | 0.5924 | likely_pathogenic | 0.5863 | pathogenic | -0.02 | Destabilizing | 0.142 | N | 0.515 | neutral | N | 0.460780996 | None | None | N |
T/K | 0.9564 | likely_pathogenic | 0.9551 | pathogenic | -0.203 | Destabilizing | 0.995 | D | 0.758 | deleterious | None | None | None | None | N |
T/L | 0.326 | likely_benign | 0.3281 | benign | -0.02 | Destabilizing | 0.839 | D | 0.666 | neutral | None | None | None | None | N |
T/M | 0.247 | likely_benign | 0.2428 | benign | -0.258 | Destabilizing | 0.998 | D | 0.799 | deleterious | None | None | None | None | N |
T/N | 0.7532 | likely_pathogenic | 0.7459 | pathogenic | -1.269 | Destabilizing | 0.998 | D | 0.745 | deleterious | N | 0.452337979 | None | None | N |
T/P | 0.92 | likely_pathogenic | 0.9302 | pathogenic | -0.404 | Destabilizing | 0.998 | D | 0.796 | deleterious | N | 0.460149112 | None | None | N |
T/Q | 0.8887 | likely_pathogenic | 0.8836 | pathogenic | -0.837 | Destabilizing | 0.998 | D | 0.808 | deleterious | None | None | None | None | N |
T/R | 0.9379 | likely_pathogenic | 0.9358 | pathogenic | -0.702 | Destabilizing | 0.998 | D | 0.801 | deleterious | None | None | None | None | N |
T/S | 0.2455 | likely_benign | 0.2367 | benign | -1.463 | Destabilizing | 0.979 | D | 0.615 | neutral | N | 0.422863904 | None | None | N |
T/V | 0.3224 | likely_benign | 0.3253 | benign | -0.404 | Destabilizing | 0.682 | D | 0.609 | neutral | None | None | None | None | N |
T/W | 0.9774 | likely_pathogenic | 0.9778 | pathogenic | -1.23 | Destabilizing | 1.0 | D | 0.816 | deleterious | None | None | None | None | N |
T/Y | 0.9136 | likely_pathogenic | 0.917 | pathogenic | -0.776 | Destabilizing | 0.995 | D | 0.824 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.