Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 25855 | 77788;77789;77790 | chr2:178568569;178568568;178568567 | chr2:179433296;179433295;179433294 |
N2AB | 24214 | 72865;72866;72867 | chr2:178568569;178568568;178568567 | chr2:179433296;179433295;179433294 |
N2A | 23287 | 70084;70085;70086 | chr2:178568569;178568568;178568567 | chr2:179433296;179433295;179433294 |
N2B | 16790 | 50593;50594;50595 | chr2:178568569;178568568;178568567 | chr2:179433296;179433295;179433294 |
Novex-1 | 16915 | 50968;50969;50970 | chr2:178568569;178568568;178568567 | chr2:179433296;179433295;179433294 |
Novex-2 | 16982 | 51169;51170;51171 | chr2:178568569;178568568;178568567 | chr2:179433296;179433295;179433294 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/F | rs1409816119 | -1.727 | 1.0 | N | 0.815 | 0.646 | 0.674917227544 | gnomAD-2.1.1 | 4.04E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.96E-06 | 0 |
L/F | rs1409816119 | -1.727 | 1.0 | N | 0.815 | 0.646 | 0.674917227544 | gnomAD-4.0.0 | 1.59192E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 3.0259E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.9269 | likely_pathogenic | 0.9384 | pathogenic | -2.494 | Highly Destabilizing | 0.999 | D | 0.733 | prob.delet. | None | None | None | None | N |
L/C | 0.8856 | likely_pathogenic | 0.9036 | pathogenic | -2.128 | Highly Destabilizing | 1.0 | D | 0.84 | deleterious | None | None | None | None | N |
L/D | 0.9996 | likely_pathogenic | 0.9997 | pathogenic | -3.177 | Highly Destabilizing | 1.0 | D | 0.892 | deleterious | None | None | None | None | N |
L/E | 0.9977 | likely_pathogenic | 0.9982 | pathogenic | -2.84 | Highly Destabilizing | 1.0 | D | 0.881 | deleterious | None | None | None | None | N |
L/F | 0.3696 | ambiguous | 0.4077 | ambiguous | -1.554 | Destabilizing | 1.0 | D | 0.815 | deleterious | N | 0.512481815 | None | None | N |
L/G | 0.991 | likely_pathogenic | 0.9931 | pathogenic | -3.127 | Highly Destabilizing | 1.0 | D | 0.872 | deleterious | None | None | None | None | N |
L/H | 0.9896 | likely_pathogenic | 0.9926 | pathogenic | -3.04 | Highly Destabilizing | 1.0 | D | 0.856 | deleterious | D | 0.56339122 | None | None | N |
L/I | 0.1288 | likely_benign | 0.1392 | benign | -0.589 | Destabilizing | 0.999 | D | 0.657 | neutral | D | 0.53654814 | None | None | N |
L/K | 0.9951 | likely_pathogenic | 0.9963 | pathogenic | -1.965 | Destabilizing | 1.0 | D | 0.873 | deleterious | None | None | None | None | N |
L/M | 0.2618 | likely_benign | 0.2829 | benign | -0.951 | Destabilizing | 1.0 | D | 0.808 | deleterious | None | None | None | None | N |
L/N | 0.9977 | likely_pathogenic | 0.9984 | pathogenic | -2.706 | Highly Destabilizing | 1.0 | D | 0.892 | deleterious | None | None | None | None | N |
L/P | 0.997 | likely_pathogenic | 0.9981 | pathogenic | -1.214 | Destabilizing | 1.0 | D | 0.891 | deleterious | D | 0.574747525 | None | None | N |
L/Q | 0.9887 | likely_pathogenic | 0.9916 | pathogenic | -2.285 | Highly Destabilizing | 1.0 | D | 0.889 | deleterious | None | None | None | None | N |
L/R | 0.9879 | likely_pathogenic | 0.9908 | pathogenic | -2.201 | Highly Destabilizing | 1.0 | D | 0.884 | deleterious | D | 0.574747525 | None | None | N |
L/S | 0.9933 | likely_pathogenic | 0.9954 | pathogenic | -3.292 | Highly Destabilizing | 1.0 | D | 0.867 | deleterious | None | None | None | None | N |
L/T | 0.9749 | likely_pathogenic | 0.9809 | pathogenic | -2.768 | Highly Destabilizing | 1.0 | D | 0.822 | deleterious | None | None | None | None | N |
L/V | 0.179 | likely_benign | 0.1848 | benign | -1.214 | Destabilizing | 0.999 | D | 0.661 | neutral | D | 0.526395788 | None | None | N |
L/W | 0.9275 | likely_pathogenic | 0.9442 | pathogenic | -1.93 | Destabilizing | 1.0 | D | 0.835 | deleterious | None | None | None | None | N |
L/Y | 0.9266 | likely_pathogenic | 0.9424 | pathogenic | -1.7 | Destabilizing | 1.0 | D | 0.85 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.