Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 25859 | 77800;77801;77802 | chr2:178568557;178568556;178568555 | chr2:179433284;179433283;179433282 |
N2AB | 24218 | 72877;72878;72879 | chr2:178568557;178568556;178568555 | chr2:179433284;179433283;179433282 |
N2A | 23291 | 70096;70097;70098 | chr2:178568557;178568556;178568555 | chr2:179433284;179433283;179433282 |
N2B | 16794 | 50605;50606;50607 | chr2:178568557;178568556;178568555 | chr2:179433284;179433283;179433282 |
Novex-1 | 16919 | 50980;50981;50982 | chr2:178568557;178568556;178568555 | chr2:179433284;179433283;179433282 |
Novex-2 | 16986 | 51181;51182;51183 | chr2:178568557;178568556;178568555 | chr2:179433284;179433283;179433282 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/D | None | None | 0.006 | N | 0.185 | 0.04 | 0.166414681773 | gnomAD-4.0.0 | 1.59193E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 2.77485E-05 | None | 0 | 0 | 0 | 0 | 0 |
E/K | rs1706857293 | None | 0.822 | N | 0.394 | 0.169 | 0.191931220699 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
E/K | rs1706857293 | None | 0.822 | N | 0.394 | 0.169 | 0.191931220699 | gnomAD-4.0.0 | 6.57765E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.47089E-05 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.4229 | ambiguous | 0.4298 | ambiguous | -0.564 | Destabilizing | 0.822 | D | 0.367 | neutral | N | 0.491398483 | None | None | N |
E/C | 0.9612 | likely_pathogenic | 0.963 | pathogenic | -0.02 | Destabilizing | 0.998 | D | 0.62 | neutral | None | None | None | None | N |
E/D | 0.1174 | likely_benign | 0.1241 | benign | -0.43 | Destabilizing | 0.006 | N | 0.185 | neutral | N | 0.411030758 | None | None | N |
E/F | 0.9424 | likely_pathogenic | 0.9487 | pathogenic | -0.497 | Destabilizing | 0.993 | D | 0.546 | neutral | None | None | None | None | N |
E/G | 0.3087 | likely_benign | 0.3141 | benign | -0.789 | Destabilizing | 0.698 | D | 0.393 | neutral | N | 0.490878408 | None | None | N |
E/H | 0.8358 | likely_pathogenic | 0.8413 | pathogenic | -0.511 | Destabilizing | 0.978 | D | 0.355 | neutral | None | None | None | None | N |
E/I | 0.8491 | likely_pathogenic | 0.8546 | pathogenic | 0.007 | Stabilizing | 0.978 | D | 0.548 | neutral | None | None | None | None | N |
E/K | 0.6028 | likely_pathogenic | 0.5977 | pathogenic | 0.106 | Stabilizing | 0.822 | D | 0.394 | neutral | N | 0.472060574 | None | None | N |
E/L | 0.8307 | likely_pathogenic | 0.8395 | pathogenic | 0.007 | Stabilizing | 0.978 | D | 0.483 | neutral | None | None | None | None | N |
E/M | 0.8049 | likely_pathogenic | 0.8081 | pathogenic | 0.317 | Stabilizing | 0.998 | D | 0.505 | neutral | None | None | None | None | N |
E/N | 0.3762 | ambiguous | 0.3773 | ambiguous | -0.151 | Destabilizing | 0.019 | N | 0.3 | neutral | None | None | None | None | N |
E/P | 0.9699 | likely_pathogenic | 0.9713 | pathogenic | -0.163 | Destabilizing | 0.993 | D | 0.373 | neutral | None | None | None | None | N |
E/Q | 0.4008 | ambiguous | 0.3939 | ambiguous | -0.115 | Destabilizing | 0.822 | D | 0.419 | neutral | N | 0.499652607 | None | None | N |
E/R | 0.7661 | likely_pathogenic | 0.7636 | pathogenic | 0.244 | Stabilizing | 0.956 | D | 0.375 | neutral | None | None | None | None | N |
E/S | 0.4523 | ambiguous | 0.4511 | ambiguous | -0.359 | Destabilizing | 0.754 | D | 0.345 | neutral | None | None | None | None | N |
E/T | 0.6151 | likely_pathogenic | 0.6179 | pathogenic | -0.178 | Destabilizing | 0.86 | D | 0.395 | neutral | None | None | None | None | N |
E/V | 0.6676 | likely_pathogenic | 0.6707 | pathogenic | -0.163 | Destabilizing | 0.97 | D | 0.443 | neutral | N | 0.462542196 | None | None | N |
E/W | 0.9813 | likely_pathogenic | 0.9827 | pathogenic | -0.351 | Destabilizing | 0.998 | D | 0.664 | neutral | None | None | None | None | N |
E/Y | 0.8451 | likely_pathogenic | 0.8606 | pathogenic | -0.264 | Destabilizing | 0.993 | D | 0.507 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.