Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 25861 | 77806;77807;77808 | chr2:178568551;178568550;178568549 | chr2:179433278;179433277;179433276 |
N2AB | 24220 | 72883;72884;72885 | chr2:178568551;178568550;178568549 | chr2:179433278;179433277;179433276 |
N2A | 23293 | 70102;70103;70104 | chr2:178568551;178568550;178568549 | chr2:179433278;179433277;179433276 |
N2B | 16796 | 50611;50612;50613 | chr2:178568551;178568550;178568549 | chr2:179433278;179433277;179433276 |
Novex-1 | 16921 | 50986;50987;50988 | chr2:178568551;178568550;178568549 | chr2:179433278;179433277;179433276 |
Novex-2 | 16988 | 51187;51188;51189 | chr2:178568551;178568550;178568549 | chr2:179433278;179433277;179433276 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
H/L | rs769029689 | None | 0.012 | N | 0.276 | 0.251 | 0.40146981186 | gnomAD-4.0.0 | 8.21246E-06 | None | None | None | None | N | None | 0 | 2.23644E-05 | None | 0 | 0 | None | 0 | 0 | 8.99672E-06 | 0 | 1.65744E-05 |
H/P | rs769029689 | 0.116 | 0.21 | N | 0.382 | 0.272 | 0.337135696972 | gnomAD-2.1.1 | 4.04E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 4.64E-05 | 0 | 0 |
H/P | rs769029689 | 0.116 | 0.21 | N | 0.382 | 0.272 | 0.337135696972 | gnomAD-4.0.0 | 6.84377E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99679E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
H/A | 0.1631 | likely_benign | 0.128 | benign | 0.411 | Stabilizing | 0.001 | N | 0.121 | neutral | None | None | None | None | N |
H/C | 0.0943 | likely_benign | 0.0868 | benign | 1.036 | Stabilizing | 0.901 | D | 0.434 | neutral | None | None | None | None | N |
H/D | 0.1806 | likely_benign | 0.1651 | benign | 0.226 | Stabilizing | 0.028 | N | 0.329 | neutral | N | 0.448766079 | None | None | N |
H/E | 0.2449 | likely_benign | 0.2211 | benign | 0.241 | Stabilizing | 0.036 | N | 0.211 | neutral | None | None | None | None | N |
H/F | 0.2355 | likely_benign | 0.2116 | benign | 0.844 | Stabilizing | 0.46 | N | 0.426 | neutral | None | None | None | None | N |
H/G | 0.179 | likely_benign | 0.1503 | benign | 0.129 | Stabilizing | 0.016 | N | 0.263 | neutral | None | None | None | None | N |
H/I | 0.2096 | likely_benign | 0.1827 | benign | 1.127 | Stabilizing | 0.002 | N | 0.197 | neutral | None | None | None | None | N |
H/K | 0.1574 | likely_benign | 0.1586 | benign | 0.471 | Stabilizing | None | N | 0.15 | neutral | None | None | None | None | N |
H/L | 0.0922 | likely_benign | 0.0832 | benign | 1.127 | Stabilizing | 0.012 | N | 0.276 | neutral | N | 0.461023301 | None | None | N |
H/M | 0.2841 | likely_benign | 0.2463 | benign | 0.999 | Stabilizing | 0.749 | D | 0.467 | neutral | None | None | None | None | N |
H/N | 0.0646 | likely_benign | 0.0569 | benign | 0.659 | Stabilizing | None | N | 0.137 | neutral | N | 0.438530443 | None | None | N |
H/P | 0.4758 | ambiguous | 0.4533 | ambiguous | 0.915 | Stabilizing | 0.21 | N | 0.382 | neutral | N | 0.481742764 | None | None | N |
H/Q | 0.1059 | likely_benign | 0.0967 | benign | 0.725 | Stabilizing | 0.002 | N | 0.183 | neutral | N | 0.419077891 | None | None | N |
H/R | 0.0882 | likely_benign | 0.0868 | benign | -0.102 | Destabilizing | 0.061 | N | 0.209 | neutral | N | 0.424331782 | None | None | N |
H/S | 0.1095 | likely_benign | 0.0881 | benign | 0.728 | Stabilizing | 0.001 | N | 0.133 | neutral | None | None | None | None | N |
H/T | 0.1282 | likely_benign | 0.1041 | benign | 0.836 | Stabilizing | 0.001 | N | 0.115 | neutral | None | None | None | None | N |
H/V | 0.148 | likely_benign | 0.1299 | benign | 0.915 | Stabilizing | 0.036 | N | 0.281 | neutral | None | None | None | None | N |
H/W | 0.3865 | ambiguous | 0.3809 | ambiguous | 0.776 | Stabilizing | 0.901 | D | 0.393 | neutral | None | None | None | None | N |
H/Y | 0.1009 | likely_benign | 0.0948 | benign | 1.16 | Stabilizing | 0.391 | N | 0.235 | neutral | N | 0.49836818 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.