Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 25863 | 77812;77813;77814 | chr2:178568545;178568544;178568543 | chr2:179433272;179433271;179433270 |
N2AB | 24222 | 72889;72890;72891 | chr2:178568545;178568544;178568543 | chr2:179433272;179433271;179433270 |
N2A | 23295 | 70108;70109;70110 | chr2:178568545;178568544;178568543 | chr2:179433272;179433271;179433270 |
N2B | 16798 | 50617;50618;50619 | chr2:178568545;178568544;178568543 | chr2:179433272;179433271;179433270 |
Novex-1 | 16923 | 50992;50993;50994 | chr2:178568545;178568544;178568543 | chr2:179433272;179433271;179433270 |
Novex-2 | 16990 | 51193;51194;51195 | chr2:178568545;178568544;178568543 | chr2:179433272;179433271;179433270 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/G | rs1171070025 | 0.054 | 0.645 | N | 0.485 | 0.227 | 0.18995819373 | gnomAD-4.0.0 | 1.59193E-06 | None | None | None | None | N | None | 0 | 2.28686E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/A | 0.1053 | likely_benign | 0.1062 | benign | -0.143 | Destabilizing | 0.477 | N | 0.459 | neutral | N | 0.465366675 | None | None | N |
D/C | 0.5115 | ambiguous | 0.4851 | ambiguous | 0.114 | Stabilizing | 0.995 | D | 0.635 | neutral | None | None | None | None | N |
D/E | 0.0883 | likely_benign | 0.0816 | benign | -0.113 | Destabilizing | 0.002 | N | 0.272 | neutral | N | 0.368952062 | None | None | N |
D/F | 0.4879 | ambiguous | 0.4823 | ambiguous | -0.29 | Destabilizing | 0.981 | D | 0.594 | neutral | None | None | None | None | N |
D/G | 0.1182 | likely_benign | 0.1144 | benign | -0.294 | Destabilizing | 0.645 | D | 0.485 | neutral | N | 0.476218387 | None | None | N |
D/H | 0.2596 | likely_benign | 0.2543 | benign | -0.029 | Destabilizing | 0.98 | D | 0.452 | neutral | N | 0.497729809 | None | None | N |
D/I | 0.2386 | likely_benign | 0.229 | benign | 0.195 | Stabilizing | 0.945 | D | 0.606 | neutral | None | None | None | None | N |
D/K | 0.2685 | likely_benign | 0.2652 | benign | 0.268 | Stabilizing | 0.547 | D | 0.477 | neutral | None | None | None | None | N |
D/L | 0.2666 | likely_benign | 0.271 | benign | 0.195 | Stabilizing | 0.894 | D | 0.597 | neutral | None | None | None | None | N |
D/M | 0.4095 | ambiguous | 0.392 | ambiguous | 0.271 | Stabilizing | 0.995 | D | 0.591 | neutral | None | None | None | None | N |
D/N | 0.089 | likely_benign | 0.0863 | benign | 0.272 | Stabilizing | 0.645 | D | 0.449 | neutral | N | 0.478565259 | None | None | N |
D/P | 0.6272 | likely_pathogenic | 0.6456 | pathogenic | 0.103 | Stabilizing | 0.945 | D | 0.475 | neutral | None | None | None | None | N |
D/Q | 0.2216 | likely_benign | 0.216 | benign | 0.265 | Stabilizing | 0.809 | D | 0.431 | neutral | None | None | None | None | N |
D/R | 0.3454 | ambiguous | 0.3401 | ambiguous | 0.428 | Stabilizing | 0.894 | D | 0.539 | neutral | None | None | None | None | N |
D/S | 0.0943 | likely_benign | 0.0909 | benign | 0.088 | Stabilizing | 0.547 | D | 0.447 | neutral | None | None | None | None | N |
D/T | 0.1499 | likely_benign | 0.1464 | benign | 0.193 | Stabilizing | 0.894 | D | 0.441 | neutral | None | None | None | None | N |
D/V | 0.1375 | likely_benign | 0.1361 | benign | 0.103 | Stabilizing | 0.864 | D | 0.59 | neutral | N | 0.497903168 | None | None | N |
D/W | 0.8129 | likely_pathogenic | 0.8103 | pathogenic | -0.25 | Destabilizing | 0.995 | D | 0.649 | neutral | None | None | None | None | N |
D/Y | 0.1973 | likely_benign | 0.2066 | benign | -0.077 | Destabilizing | 0.975 | D | 0.595 | neutral | N | 0.514603417 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.