Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 25870 | 77833;77834;77835 | chr2:178568524;178568523;178568522 | chr2:179433251;179433250;179433249 |
N2AB | 24229 | 72910;72911;72912 | chr2:178568524;178568523;178568522 | chr2:179433251;179433250;179433249 |
N2A | 23302 | 70129;70130;70131 | chr2:178568524;178568523;178568522 | chr2:179433251;179433250;179433249 |
N2B | 16805 | 50638;50639;50640 | chr2:178568524;178568523;178568522 | chr2:179433251;179433250;179433249 |
Novex-1 | 16930 | 51013;51014;51015 | chr2:178568524;178568523;178568522 | chr2:179433251;179433250;179433249 |
Novex-2 | 16997 | 51214;51215;51216 | chr2:178568524;178568523;178568522 | chr2:179433251;179433250;179433249 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/L | rs767544449 | -0.83 | 0.426 | N | 0.411 | 0.127 | 0.424313518543 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.93E-06 | 0 |
I/T | rs754843336 | -2.836 | 0.892 | N | 0.749 | 0.394 | 0.660037784989 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.93E-06 | 0 |
I/T | rs754843336 | -2.836 | 0.892 | N | 0.749 | 0.394 | 0.660037784989 | gnomAD-4.0.0 | 3.42176E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 4.49813E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.9346 | likely_pathogenic | 0.9282 | pathogenic | -2.524 | Highly Destabilizing | 0.845 | D | 0.725 | prob.delet. | None | None | None | None | N |
I/C | 0.9174 | likely_pathogenic | 0.9093 | pathogenic | -2.072 | Highly Destabilizing | 0.999 | D | 0.715 | prob.delet. | None | None | None | None | N |
I/D | 0.9986 | likely_pathogenic | 0.9986 | pathogenic | -2.662 | Highly Destabilizing | 0.996 | D | 0.836 | deleterious | None | None | None | None | N |
I/E | 0.9959 | likely_pathogenic | 0.9961 | pathogenic | -2.408 | Highly Destabilizing | 0.987 | D | 0.835 | deleterious | None | None | None | None | N |
I/F | 0.3948 | ambiguous | 0.3774 | ambiguous | -1.546 | Destabilizing | 0.967 | D | 0.689 | prob.neutral | N | 0.492647866 | None | None | N |
I/G | 0.9871 | likely_pathogenic | 0.9859 | pathogenic | -3.112 | Highly Destabilizing | 0.987 | D | 0.829 | deleterious | None | None | None | None | N |
I/H | 0.9923 | likely_pathogenic | 0.9928 | pathogenic | -2.616 | Highly Destabilizing | 0.999 | D | 0.813 | deleterious | None | None | None | None | N |
I/K | 0.9879 | likely_pathogenic | 0.9891 | pathogenic | -1.806 | Destabilizing | 0.987 | D | 0.835 | deleterious | None | None | None | None | N |
I/L | 0.1488 | likely_benign | 0.1323 | benign | -0.811 | Destabilizing | 0.426 | N | 0.411 | neutral | N | 0.453552171 | None | None | N |
I/M | 0.1775 | likely_benign | 0.1631 | benign | -0.942 | Destabilizing | 0.983 | D | 0.663 | neutral | N | 0.457453314 | None | None | N |
I/N | 0.9809 | likely_pathogenic | 0.9818 | pathogenic | -2.209 | Highly Destabilizing | 0.994 | D | 0.835 | deleterious | N | 0.494168803 | None | None | N |
I/P | 0.9949 | likely_pathogenic | 0.9949 | pathogenic | -1.364 | Destabilizing | 0.996 | D | 0.837 | deleterious | None | None | None | None | N |
I/Q | 0.9887 | likely_pathogenic | 0.9893 | pathogenic | -2.011 | Highly Destabilizing | 0.996 | D | 0.841 | deleterious | None | None | None | None | N |
I/R | 0.9834 | likely_pathogenic | 0.9846 | pathogenic | -1.676 | Destabilizing | 0.987 | D | 0.843 | deleterious | None | None | None | None | N |
I/S | 0.9787 | likely_pathogenic | 0.9785 | pathogenic | -2.983 | Highly Destabilizing | 0.983 | D | 0.799 | deleterious | N | 0.493915314 | None | None | N |
I/T | 0.9661 | likely_pathogenic | 0.9657 | pathogenic | -2.56 | Highly Destabilizing | 0.892 | D | 0.749 | deleterious | N | 0.493661824 | None | None | N |
I/V | 0.1205 | likely_benign | 0.1131 | benign | -1.364 | Destabilizing | 0.011 | N | 0.291 | neutral | N | 0.426808287 | None | None | N |
I/W | 0.9829 | likely_pathogenic | 0.9825 | pathogenic | -1.889 | Destabilizing | 0.999 | D | 0.79 | deleterious | None | None | None | None | N |
I/Y | 0.9341 | likely_pathogenic | 0.9348 | pathogenic | -1.6 | Destabilizing | 0.987 | D | 0.726 | prob.delet. | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.