Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 25875 | 77848;77849;77850 | chr2:178568509;178568508;178568507 | chr2:179433236;179433235;179433234 |
N2AB | 24234 | 72925;72926;72927 | chr2:178568509;178568508;178568507 | chr2:179433236;179433235;179433234 |
N2A | 23307 | 70144;70145;70146 | chr2:178568509;178568508;178568507 | chr2:179433236;179433235;179433234 |
N2B | 16810 | 50653;50654;50655 | chr2:178568509;178568508;178568507 | chr2:179433236;179433235;179433234 |
Novex-1 | 16935 | 51028;51029;51030 | chr2:178568509;178568508;178568507 | chr2:179433236;179433235;179433234 |
Novex-2 | 17002 | 51229;51230;51231 | chr2:178568509;178568508;178568507 | chr2:179433236;179433235;179433234 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | rs370374073 | -0.145 | 0.003 | N | 0.101 | 0.085 | None | gnomAD-2.1.1 | 3.94E-05 | None | None | None | None | I | None | 4.54846E-04 | 0 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
V/A | rs370374073 | -0.145 | 0.003 | N | 0.101 | 0.085 | None | gnomAD-3.1.2 | 9.21E-05 | None | None | None | None | I | None | 2.89603E-04 | 1.31148E-04 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
V/A | rs370374073 | -0.145 | 0.003 | N | 0.101 | 0.085 | None | gnomAD-4.0.0 | 1.67358E-05 | None | None | None | None | I | None | 2.93772E-04 | 3.336E-05 | None | 0 | 0 | None | 0 | 0 | 1.69553E-06 | 0 | 1.60174E-05 |
V/I | rs763284241 | -0.061 | 0.007 | N | 0.249 | 0.153 | 0.364926071151 | gnomAD-2.1.1 | 2.82E-05 | None | None | None | None | I | None | 0 | 1.45062E-04 | None | 0 | 0 | None | 0 | None | 0 | 1.78E-05 | 0 |
V/I | rs763284241 | -0.061 | 0.007 | N | 0.249 | 0.153 | 0.364926071151 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | I | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
V/I | rs763284241 | -0.061 | 0.007 | N | 0.249 | 0.153 | 0.364926071151 | gnomAD-4.0.0 | 5.57852E-06 | None | None | None | None | I | None | 1.33526E-05 | 8.33834E-05 | None | 0 | 0 | None | 0 | 0 | 2.5433E-06 | 0 | 0 |
V/L | rs763284241 | -0.047 | 0.309 | N | 0.35 | 0.118 | 0.4722639086 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 5.59E-05 | None | 0 | None | 0 | 0 | 0 |
V/L | rs763284241 | -0.047 | 0.309 | N | 0.35 | 0.118 | 0.4722639086 | gnomAD-4.0.0 | 6.84346E-07 | None | None | None | None | I | None | 0 | 0 | None | 0 | 2.5227E-05 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.0914 | likely_benign | 0.0857 | benign | -0.412 | Destabilizing | 0.003 | N | 0.101 | neutral | N | 0.415365582 | None | None | I |
V/C | 0.5724 | likely_pathogenic | 0.518 | ambiguous | -0.872 | Destabilizing | 0.987 | D | 0.355 | neutral | None | None | None | None | I |
V/D | 0.2831 | likely_benign | 0.2495 | benign | -0.377 | Destabilizing | 0.684 | D | 0.387 | neutral | N | 0.455924125 | None | None | I |
V/E | 0.2831 | likely_benign | 0.2466 | benign | -0.488 | Destabilizing | 0.742 | D | 0.393 | neutral | None | None | None | None | I |
V/F | 0.1704 | likely_benign | 0.1406 | benign | -0.717 | Destabilizing | 0.884 | D | 0.353 | neutral | N | 0.512990916 | None | None | I |
V/G | 0.1522 | likely_benign | 0.15 | benign | -0.486 | Destabilizing | 0.521 | D | 0.408 | neutral | N | 0.455116049 | None | None | I |
V/H | 0.3964 | ambiguous | 0.3421 | ambiguous | -0.03 | Destabilizing | 0.996 | D | 0.367 | neutral | None | None | None | None | I |
V/I | 0.0699 | likely_benign | 0.066 | benign | -0.357 | Destabilizing | 0.007 | N | 0.249 | neutral | N | 0.476376755 | None | None | I |
V/K | 0.2737 | likely_benign | 0.2313 | benign | -0.484 | Destabilizing | 0.742 | D | 0.387 | neutral | None | None | None | None | I |
V/L | 0.1484 | likely_benign | 0.1209 | benign | -0.357 | Destabilizing | 0.309 | N | 0.35 | neutral | N | 0.474683244 | None | None | I |
V/M | 0.105 | likely_benign | 0.0938 | benign | -0.609 | Destabilizing | 0.91 | D | 0.317 | neutral | None | None | None | None | I |
V/N | 0.1685 | likely_benign | 0.1396 | benign | -0.331 | Destabilizing | 0.91 | D | 0.385 | neutral | None | None | None | None | I |
V/P | 0.3381 | likely_benign | 0.2809 | benign | -0.347 | Destabilizing | 0.009 | N | 0.313 | neutral | None | None | None | None | I |
V/Q | 0.259 | likely_benign | 0.2347 | benign | -0.532 | Destabilizing | 0.953 | D | 0.396 | neutral | None | None | None | None | I |
V/R | 0.2571 | likely_benign | 0.2124 | benign | -0.011 | Destabilizing | 0.953 | D | 0.391 | neutral | None | None | None | None | I |
V/S | 0.1179 | likely_benign | 0.1088 | benign | -0.646 | Destabilizing | 0.101 | N | 0.269 | neutral | None | None | None | None | I |
V/T | 0.1043 | likely_benign | 0.092 | benign | -0.662 | Destabilizing | 0.373 | N | 0.323 | neutral | None | None | None | None | I |
V/W | 0.7378 | likely_pathogenic | 0.6773 | pathogenic | -0.776 | Destabilizing | 0.996 | D | 0.477 | neutral | None | None | None | None | I |
V/Y | 0.4528 | ambiguous | 0.3931 | ambiguous | -0.51 | Destabilizing | 0.984 | D | 0.353 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.