Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 25895 | 77908;77909;77910 | chr2:178568449;178568448;178568447 | chr2:179433176;179433175;179433174 |
N2AB | 24254 | 72985;72986;72987 | chr2:178568449;178568448;178568447 | chr2:179433176;179433175;179433174 |
N2A | 23327 | 70204;70205;70206 | chr2:178568449;178568448;178568447 | chr2:179433176;179433175;179433174 |
N2B | 16830 | 50713;50714;50715 | chr2:178568449;178568448;178568447 | chr2:179433176;179433175;179433174 |
Novex-1 | 16955 | 51088;51089;51090 | chr2:178568449;178568448;178568447 | chr2:179433176;179433175;179433174 |
Novex-2 | 17022 | 51289;51290;51291 | chr2:178568449;178568448;178568447 | chr2:179433176;179433175;179433174 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/E | rs1706799678 | None | 0.042 | N | 0.405 | 0.055 | 0.166414681773 | gnomAD-4.0.0 | 1.59231E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85969E-06 | 0 | 0 |
K/T | rs751395038 | -1.207 | None | N | 0.293 | 0.078 | 0.171388866994 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 0 | 2.9E-05 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
K/T | rs751395038 | -1.207 | None | N | 0.293 | 0.078 | 0.171388866994 | gnomAD-4.0.0 | 3.18459E-06 | None | None | None | None | N | None | 0 | 2.28822E-05 | None | 0 | 0 | None | 0 | 0 | 2.85971E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.1221 | likely_benign | 0.125 | benign | -0.508 | Destabilizing | 0.025 | N | 0.357 | neutral | None | None | None | None | N |
K/C | 0.2735 | likely_benign | 0.2626 | benign | -0.417 | Destabilizing | 0.001 | N | 0.411 | neutral | None | None | None | None | N |
K/D | 0.3995 | ambiguous | 0.418 | ambiguous | -0.275 | Destabilizing | 0.22 | N | 0.486 | neutral | None | None | None | None | N |
K/E | 0.0959 | likely_benign | 0.0965 | benign | -0.142 | Destabilizing | 0.042 | N | 0.405 | neutral | N | 0.403894142 | None | None | N |
K/F | 0.4772 | ambiguous | 0.4912 | ambiguous | -0.006 | Destabilizing | 0.497 | N | 0.654 | neutral | None | None | None | None | N |
K/G | 0.2264 | likely_benign | 0.2184 | benign | -0.9 | Destabilizing | 0.104 | N | 0.452 | neutral | None | None | None | None | N |
K/H | 0.2013 | likely_benign | 0.2 | benign | -1.229 | Destabilizing | 0.497 | N | 0.489 | neutral | None | None | None | None | N |
K/I | 0.1264 | likely_benign | 0.1221 | benign | 0.52 | Stabilizing | 0.042 | N | 0.478 | neutral | N | 0.496092227 | None | None | N |
K/L | 0.152 | likely_benign | 0.1462 | benign | 0.52 | Stabilizing | 0.025 | N | 0.373 | neutral | None | None | None | None | N |
K/M | 0.1077 | likely_benign | 0.104 | benign | 0.245 | Stabilizing | 0.667 | D | 0.505 | neutral | None | None | None | None | N |
K/N | 0.2353 | likely_benign | 0.2394 | benign | -0.541 | Destabilizing | 0.175 | N | 0.418 | neutral | N | 0.474236874 | None | None | N |
K/P | 0.7669 | likely_pathogenic | 0.7837 | pathogenic | 0.207 | Stabilizing | 0.364 | N | 0.517 | neutral | None | None | None | None | N |
K/Q | 0.0764 | likely_benign | 0.0729 | benign | -0.494 | Destabilizing | 0.001 | N | 0.314 | neutral | N | 0.410340111 | None | None | N |
K/R | 0.0738 | likely_benign | 0.0709 | benign | -0.773 | Destabilizing | None | N | 0.211 | neutral | N | 0.442567173 | None | None | N |
K/S | 0.1641 | likely_benign | 0.1632 | benign | -1.069 | Destabilizing | 0.055 | N | 0.379 | neutral | None | None | None | None | N |
K/T | 0.0719 | likely_benign | 0.0704 | benign | -0.729 | Destabilizing | None | N | 0.293 | neutral | N | 0.381710715 | None | None | N |
K/V | 0.0996 | likely_benign | 0.094 | benign | 0.207 | Stabilizing | None | N | 0.401 | neutral | None | None | None | None | N |
K/W | 0.6198 | likely_pathogenic | 0.6154 | pathogenic | 0.036 | Stabilizing | 0.958 | D | 0.624 | neutral | None | None | None | None | N |
K/Y | 0.3939 | ambiguous | 0.4104 | ambiguous | 0.291 | Stabilizing | 0.667 | D | 0.643 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.