Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 25900 | 77923;77924;77925 | chr2:178568434;178568433;178568432 | chr2:179433161;179433160;179433159 |
N2AB | 24259 | 73000;73001;73002 | chr2:178568434;178568433;178568432 | chr2:179433161;179433160;179433159 |
N2A | 23332 | 70219;70220;70221 | chr2:178568434;178568433;178568432 | chr2:179433161;179433160;179433159 |
N2B | 16835 | 50728;50729;50730 | chr2:178568434;178568433;178568432 | chr2:179433161;179433160;179433159 |
Novex-1 | 16960 | 51103;51104;51105 | chr2:178568434;178568433;178568432 | chr2:179433161;179433160;179433159 |
Novex-2 | 17027 | 51304;51305;51306 | chr2:178568434;178568433;178568432 | chr2:179433161;179433160;179433159 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
F/S | rs1189958133 | None | 0.912 | N | 0.646 | 0.47 | 0.644325926208 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | N | None | 2.41E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
F/S | rs1189958133 | None | 0.912 | N | 0.646 | 0.47 | 0.644325926208 | gnomAD-4.0.0 | 6.57618E-06 | None | None | None | None | N | None | 2.41301E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
F/A | 0.5628 | ambiguous | 0.6199 | pathogenic | -2.429 | Highly Destabilizing | 0.737 | D | 0.478 | neutral | None | None | None | None | N |
F/C | 0.2968 | likely_benign | 0.3431 | ambiguous | -1.908 | Destabilizing | 0.998 | D | 0.702 | prob.neutral | N | 0.473347475 | None | None | N |
F/D | 0.9554 | likely_pathogenic | 0.9689 | pathogenic | -1.487 | Destabilizing | 0.993 | D | 0.748 | deleterious | None | None | None | None | N |
F/E | 0.9416 | likely_pathogenic | 0.9595 | pathogenic | -1.304 | Destabilizing | 0.993 | D | 0.748 | deleterious | None | None | None | None | N |
F/G | 0.8769 | likely_pathogenic | 0.9061 | pathogenic | -2.858 | Highly Destabilizing | 0.932 | D | 0.72 | prob.delet. | None | None | None | None | N |
F/H | 0.8149 | likely_pathogenic | 0.8526 | pathogenic | -1.23 | Destabilizing | 0.998 | D | 0.667 | neutral | None | None | None | None | N |
F/I | 0.1289 | likely_benign | 0.1592 | benign | -1.082 | Destabilizing | 0.028 | N | 0.255 | neutral | N | 0.411679411 | None | None | N |
F/K | 0.9143 | likely_pathogenic | 0.9372 | pathogenic | -1.846 | Destabilizing | 0.932 | D | 0.744 | deleterious | None | None | None | None | N |
F/L | 0.7535 | likely_pathogenic | 0.8142 | pathogenic | -1.082 | Destabilizing | 0.007 | N | 0.201 | neutral | N | 0.471919793 | None | None | N |
F/M | 0.3365 | likely_benign | 0.3749 | ambiguous | -1.002 | Destabilizing | 0.38 | N | 0.367 | neutral | None | None | None | None | N |
F/N | 0.8588 | likely_pathogenic | 0.8973 | pathogenic | -2.14 | Highly Destabilizing | 0.993 | D | 0.737 | prob.delet. | None | None | None | None | N |
F/P | 0.9607 | likely_pathogenic | 0.9625 | pathogenic | -1.533 | Destabilizing | 0.993 | D | 0.737 | prob.delet. | None | None | None | None | N |
F/Q | 0.8846 | likely_pathogenic | 0.9184 | pathogenic | -2.037 | Highly Destabilizing | 0.98 | D | 0.74 | deleterious | None | None | None | None | N |
F/R | 0.8699 | likely_pathogenic | 0.906 | pathogenic | -1.383 | Destabilizing | 0.98 | D | 0.737 | prob.delet. | None | None | None | None | N |
F/S | 0.6428 | likely_pathogenic | 0.7263 | pathogenic | -3.013 | Highly Destabilizing | 0.912 | D | 0.646 | neutral | N | 0.479423862 | None | None | N |
F/T | 0.4956 | ambiguous | 0.5772 | pathogenic | -2.713 | Highly Destabilizing | 0.872 | D | 0.625 | neutral | None | None | None | None | N |
F/V | 0.1663 | likely_benign | 0.204 | benign | -1.533 | Destabilizing | 0.028 | N | 0.325 | neutral | N | 0.390781276 | None | None | N |
F/W | 0.4928 | ambiguous | 0.527 | ambiguous | -0.146 | Destabilizing | 0.998 | D | 0.591 | neutral | None | None | None | None | N |
F/Y | 0.2254 | likely_benign | 0.243 | benign | -0.509 | Destabilizing | 0.969 | D | 0.537 | neutral | N | 0.494722082 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.