Isoform Positions

Isoform Protein Position Transcript Position Chromosomal Position (HG38) Chromosomal Position (HG19)
IC2590377932;77933;77934 chr2:178568425;178568424;178568423chr2:179433152;179433151;179433150
N2AB2426273009;73010;73011 chr2:178568425;178568424;178568423chr2:179433152;179433151;179433150
N2A2333570228;70229;70230 chr2:178568425;178568424;178568423chr2:179433152;179433151;179433150
N2B1683850737;50738;50739 chr2:178568425;178568424;178568423chr2:179433152;179433151;179433150
Novex-11696351112;51113;51114 chr2:178568425;178568424;178568423chr2:179433152;179433151;179433150
Novex-21703051313;51314;51315 chr2:178568425;178568424;178568423chr2:179433152;179433151;179433150
Novex-3NoneNone chr2:Nonechr2:None

Information

  • RefSeq wild type amino acid: V
  • RefSeq wild type transcript codon: GTC
  • RefSeq wild type template codon: CAG
  • Domain: Fn3-76
  • Domain position: 14
  • Structural Position: 15
  • Q(SASA): 0.42
  • Predicted PPI site: N

Reported SAVs

SNV RS
DUET
PolyPhen-2
Condel
Rhapsody
REVEL
MVP
Source
MAF
Disease
Zygosity
Site annotation
mCSM PPI
Predicted PPI site
Comments
AFR
AMR
AMS
ASJ
EAS
EUR
FIN
MDE
NFE
SAS
OTH
V/D rs764027734 -0.209 0.667 D 0.719 0.508 0.798081691357 gnomAD-2.1.1 1.21E-05 None None None None N None 0 0 None 0 0 None 6.54E-05 None 0 8.9E-06 0
V/D rs764027734 -0.209 0.667 D 0.719 0.508 0.798081691357 gnomAD-4.0.0 1.27397E-05 None None None None N None 0 0 None 0 0 None 0 0 1.14391E-05 5.7323E-05 0
V/G None None 0.667 N 0.699 0.502 0.769505205396 gnomAD-4.0.0 1.59247E-06 None None None None N None 0 0 None 0 0 None 0 0 2.85977E-06 0 0
V/I rs570615498 -0.49 0.002 N 0.138 0.085 None gnomAD-2.1.1 1.46659E-04 None None None None N None 1.65426E-04 8.51E-05 None 0 5.17E-05 None 9.81E-05 None 1.20144E-04 2.11248E-04 0
V/I rs570615498 -0.49 0.002 N 0.138 0.085 None gnomAD-3.1.2 8.55E-05 None None None None N None 1.20802E-04 1.31216E-04 0 0 0 None 3.77216E-04 0 2.94E-05 0 0
V/I rs570615498 -0.49 0.002 N 0.138 0.085 None 1000 genomes 1.99681E-04 None None None None N None 8E-04 0 None None 0 0 None None None 0 None
V/I rs570615498 -0.49 0.002 N 0.138 0.085 None gnomAD-4.0.0 8.80262E-05 None None None None N None 9.33881E-05 1.00113E-04 None 3.37929E-05 0 None 7.81983E-05 0 9.57994E-05 7.68724E-05 4.8043E-05
V/L None None 0.022 N 0.298 0.134 0.355242300401 gnomAD-4.0.0 1.36888E-06 None None None None N None 0 0 None 0 0 None 0 0 1.79925E-06 0 0

Saturation Mutagenesis

SAV
AlphaMissense (IC)
AlphaMissense Class (IC)
AlphaMissense (N2AB)
AlphaMissense Class (N2AB)
mCSM
mCSM class
PolyPhen-2
PolyPhen-2 Class
Rhapsody
Rhapsody Class
Condel
Condel Score
Site annotation
mCSM PPI
Predicted PPI site
V/A 0.4596 ambiguous 0.5676 pathogenic -1.665 Destabilizing 0.104 N 0.493 neutral N 0.48973021 None None N
V/C 0.7763 likely_pathogenic 0.8134 pathogenic -1.73 Destabilizing 0.968 D 0.563 neutral None None None None N
V/D 0.8465 likely_pathogenic 0.913 pathogenic -1.145 Destabilizing 0.667 D 0.719 prob.delet. D 0.529990872 None None N
V/E 0.7229 likely_pathogenic 0.8139 pathogenic -1.062 Destabilizing 0.726 D 0.663 neutral None None None None N
V/F 0.3014 likely_benign 0.4104 ambiguous -1.279 Destabilizing 0.715 D 0.573 neutral N 0.482870583 None None N
V/G 0.6394 likely_pathogenic 0.7274 pathogenic -2.047 Highly Destabilizing 0.667 D 0.699 prob.neutral N 0.519648524 None None N
V/H 0.8478 likely_pathogenic 0.9043 pathogenic -1.577 Destabilizing 0.968 D 0.724 prob.delet. None None None None N
V/I 0.0602 likely_benign 0.0594 benign -0.681 Destabilizing 0.002 N 0.138 neutral N 0.490409553 None None N
V/K 0.6504 likely_pathogenic 0.7194 pathogenic -1.168 Destabilizing 0.726 D 0.673 neutral None None None None N
V/L 0.2706 likely_benign 0.3308 benign -0.681 Destabilizing 0.022 N 0.298 neutral N 0.474562016 None None N
V/M 0.2184 likely_benign 0.2616 benign -0.878 Destabilizing 0.567 D 0.483 neutral None None None None N
V/N 0.6454 likely_pathogenic 0.7615 pathogenic -1.158 Destabilizing 0.89 D 0.719 prob.delet. None None None None N
V/P 0.8957 likely_pathogenic 0.9164 pathogenic -0.976 Destabilizing 0.89 D 0.668 neutral None None None None N
V/Q 0.6769 likely_pathogenic 0.759 pathogenic -1.208 Destabilizing 0.89 D 0.677 prob.neutral None None None None N
V/R 0.6099 likely_pathogenic 0.6886 pathogenic -0.882 Destabilizing 0.726 D 0.718 prob.delet. None None None None N
V/S 0.5663 likely_pathogenic 0.6854 pathogenic -1.897 Destabilizing 0.726 D 0.579 neutral None None None None N
V/T 0.3719 ambiguous 0.4493 ambiguous -1.677 Destabilizing 0.272 N 0.453 neutral None None None None N
V/W 0.934 likely_pathogenic 0.9582 pathogenic -1.446 Destabilizing 0.968 D 0.734 prob.delet. None None None None N
V/Y 0.7316 likely_pathogenic 0.8284 pathogenic -1.112 Destabilizing 0.726 D 0.578 neutral None None None None N

Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.