Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 25903 | 77932;77933;77934 | chr2:178568425;178568424;178568423 | chr2:179433152;179433151;179433150 |
N2AB | 24262 | 73009;73010;73011 | chr2:178568425;178568424;178568423 | chr2:179433152;179433151;179433150 |
N2A | 23335 | 70228;70229;70230 | chr2:178568425;178568424;178568423 | chr2:179433152;179433151;179433150 |
N2B | 16838 | 50737;50738;50739 | chr2:178568425;178568424;178568423 | chr2:179433152;179433151;179433150 |
Novex-1 | 16963 | 51112;51113;51114 | chr2:178568425;178568424;178568423 | chr2:179433152;179433151;179433150 |
Novex-2 | 17030 | 51313;51314;51315 | chr2:178568425;178568424;178568423 | chr2:179433152;179433151;179433150 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/D | rs764027734 | -0.209 | 0.667 | D | 0.719 | 0.508 | 0.798081691357 | gnomAD-2.1.1 | 1.21E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 6.54E-05 | None | 0 | 8.9E-06 | 0 |
V/D | rs764027734 | -0.209 | 0.667 | D | 0.719 | 0.508 | 0.798081691357 | gnomAD-4.0.0 | 1.27397E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.14391E-05 | 5.7323E-05 | 0 |
V/G | None | None | 0.667 | N | 0.699 | 0.502 | 0.769505205396 | gnomAD-4.0.0 | 1.59247E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85977E-06 | 0 | 0 |
V/I | rs570615498 | -0.49 | 0.002 | N | 0.138 | 0.085 | None | gnomAD-2.1.1 | 1.46659E-04 | None | None | None | None | N | None | 1.65426E-04 | 8.51E-05 | None | 0 | 5.17E-05 | None | 9.81E-05 | None | 1.20144E-04 | 2.11248E-04 | 0 |
V/I | rs570615498 | -0.49 | 0.002 | N | 0.138 | 0.085 | None | gnomAD-3.1.2 | 8.55E-05 | None | None | None | None | N | None | 1.20802E-04 | 1.31216E-04 | 0 | 0 | 0 | None | 3.77216E-04 | 0 | 2.94E-05 | 0 | 0 |
V/I | rs570615498 | -0.49 | 0.002 | N | 0.138 | 0.085 | None | 1000 genomes | 1.99681E-04 | None | None | None | None | N | None | 8E-04 | 0 | None | None | 0 | 0 | None | None | None | 0 | None |
V/I | rs570615498 | -0.49 | 0.002 | N | 0.138 | 0.085 | None | gnomAD-4.0.0 | 8.80262E-05 | None | None | None | None | N | None | 9.33881E-05 | 1.00113E-04 | None | 3.37929E-05 | 0 | None | 7.81983E-05 | 0 | 9.57994E-05 | 7.68724E-05 | 4.8043E-05 |
V/L | None | None | 0.022 | N | 0.298 | 0.134 | 0.355242300401 | gnomAD-4.0.0 | 1.36888E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.79925E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.4596 | ambiguous | 0.5676 | pathogenic | -1.665 | Destabilizing | 0.104 | N | 0.493 | neutral | N | 0.48973021 | None | None | N |
V/C | 0.7763 | likely_pathogenic | 0.8134 | pathogenic | -1.73 | Destabilizing | 0.968 | D | 0.563 | neutral | None | None | None | None | N |
V/D | 0.8465 | likely_pathogenic | 0.913 | pathogenic | -1.145 | Destabilizing | 0.667 | D | 0.719 | prob.delet. | D | 0.529990872 | None | None | N |
V/E | 0.7229 | likely_pathogenic | 0.8139 | pathogenic | -1.062 | Destabilizing | 0.726 | D | 0.663 | neutral | None | None | None | None | N |
V/F | 0.3014 | likely_benign | 0.4104 | ambiguous | -1.279 | Destabilizing | 0.715 | D | 0.573 | neutral | N | 0.482870583 | None | None | N |
V/G | 0.6394 | likely_pathogenic | 0.7274 | pathogenic | -2.047 | Highly Destabilizing | 0.667 | D | 0.699 | prob.neutral | N | 0.519648524 | None | None | N |
V/H | 0.8478 | likely_pathogenic | 0.9043 | pathogenic | -1.577 | Destabilizing | 0.968 | D | 0.724 | prob.delet. | None | None | None | None | N |
V/I | 0.0602 | likely_benign | 0.0594 | benign | -0.681 | Destabilizing | 0.002 | N | 0.138 | neutral | N | 0.490409553 | None | None | N |
V/K | 0.6504 | likely_pathogenic | 0.7194 | pathogenic | -1.168 | Destabilizing | 0.726 | D | 0.673 | neutral | None | None | None | None | N |
V/L | 0.2706 | likely_benign | 0.3308 | benign | -0.681 | Destabilizing | 0.022 | N | 0.298 | neutral | N | 0.474562016 | None | None | N |
V/M | 0.2184 | likely_benign | 0.2616 | benign | -0.878 | Destabilizing | 0.567 | D | 0.483 | neutral | None | None | None | None | N |
V/N | 0.6454 | likely_pathogenic | 0.7615 | pathogenic | -1.158 | Destabilizing | 0.89 | D | 0.719 | prob.delet. | None | None | None | None | N |
V/P | 0.8957 | likely_pathogenic | 0.9164 | pathogenic | -0.976 | Destabilizing | 0.89 | D | 0.668 | neutral | None | None | None | None | N |
V/Q | 0.6769 | likely_pathogenic | 0.759 | pathogenic | -1.208 | Destabilizing | 0.89 | D | 0.677 | prob.neutral | None | None | None | None | N |
V/R | 0.6099 | likely_pathogenic | 0.6886 | pathogenic | -0.882 | Destabilizing | 0.726 | D | 0.718 | prob.delet. | None | None | None | None | N |
V/S | 0.5663 | likely_pathogenic | 0.6854 | pathogenic | -1.897 | Destabilizing | 0.726 | D | 0.579 | neutral | None | None | None | None | N |
V/T | 0.3719 | ambiguous | 0.4493 | ambiguous | -1.677 | Destabilizing | 0.272 | N | 0.453 | neutral | None | None | None | None | N |
V/W | 0.934 | likely_pathogenic | 0.9582 | pathogenic | -1.446 | Destabilizing | 0.968 | D | 0.734 | prob.delet. | None | None | None | None | N |
V/Y | 0.7316 | likely_pathogenic | 0.8284 | pathogenic | -1.112 | Destabilizing | 0.726 | D | 0.578 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.