Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 25904 | 77935;77936;77937 | chr2:178568422;178568421;178568420 | chr2:179433149;179433148;179433147 |
N2AB | 24263 | 73012;73013;73014 | chr2:178568422;178568421;178568420 | chr2:179433149;179433148;179433147 |
N2A | 23336 | 70231;70232;70233 | chr2:178568422;178568421;178568420 | chr2:179433149;179433148;179433147 |
N2B | 16839 | 50740;50741;50742 | chr2:178568422;178568421;178568420 | chr2:179433149;179433148;179433147 |
Novex-1 | 16964 | 51115;51116;51117 | chr2:178568422;178568421;178568420 | chr2:179433149;179433148;179433147 |
Novex-2 | 17031 | 51316;51317;51318 | chr2:178568422;178568421;178568420 | chr2:179433149;179433148;179433147 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/R | None | None | 0.967 | D | 0.659 | 0.385 | 0.268211541103 | gnomAD-4.0.0 | 2.40065E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.62501E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.1626 | likely_benign | 0.182 | benign | -0.869 | Destabilizing | 0.693 | D | 0.407 | neutral | None | None | None | None | N |
S/C | 0.1966 | likely_benign | 0.2171 | benign | -0.653 | Destabilizing | 0.999 | D | 0.617 | neutral | D | 0.526863773 | None | None | N |
S/D | 0.7654 | likely_pathogenic | 0.779 | pathogenic | -0.611 | Destabilizing | 0.916 | D | 0.561 | neutral | None | None | None | None | N |
S/E | 0.9246 | likely_pathogenic | 0.9328 | pathogenic | -0.561 | Destabilizing | 0.916 | D | 0.562 | neutral | None | None | None | None | N |
S/F | 0.5486 | ambiguous | 0.6231 | pathogenic | -0.933 | Destabilizing | 0.987 | D | 0.685 | prob.neutral | None | None | None | None | N |
S/G | 0.1608 | likely_benign | 0.1764 | benign | -1.158 | Destabilizing | 0.892 | D | 0.45 | neutral | N | 0.516094644 | None | None | N |
S/H | 0.7609 | likely_pathogenic | 0.7701 | pathogenic | -1.55 | Destabilizing | 0.999 | D | 0.609 | neutral | None | None | None | None | N |
S/I | 0.6151 | likely_pathogenic | 0.6775 | pathogenic | -0.19 | Destabilizing | 0.967 | D | 0.699 | prob.neutral | N | 0.497238628 | None | None | N |
S/K | 0.953 | likely_pathogenic | 0.9554 | pathogenic | -0.667 | Destabilizing | 0.916 | D | 0.563 | neutral | None | None | None | None | N |
S/L | 0.1846 | likely_benign | 0.2047 | benign | -0.19 | Destabilizing | 0.845 | D | 0.593 | neutral | None | None | None | None | N |
S/M | 0.3682 | ambiguous | 0.3791 | ambiguous | 0.034 | Stabilizing | 0.999 | D | 0.614 | neutral | None | None | None | None | N |
S/N | 0.3309 | likely_benign | 0.3656 | ambiguous | -0.834 | Destabilizing | 0.892 | D | 0.57 | neutral | N | 0.52128982 | None | None | N |
S/P | 0.969 | likely_pathogenic | 0.9741 | pathogenic | -0.382 | Destabilizing | 0.987 | D | 0.655 | neutral | None | None | None | None | N |
S/Q | 0.8821 | likely_pathogenic | 0.8822 | pathogenic | -0.92 | Destabilizing | 0.987 | D | 0.643 | neutral | None | None | None | None | N |
S/R | 0.9378 | likely_pathogenic | 0.9425 | pathogenic | -0.634 | Destabilizing | 0.967 | D | 0.659 | neutral | D | 0.523311405 | None | None | N |
S/T | 0.0883 | likely_benign | 0.0865 | benign | -0.781 | Destabilizing | 0.025 | N | 0.333 | neutral | N | 0.427550153 | None | None | N |
S/V | 0.5176 | ambiguous | 0.5673 | pathogenic | -0.382 | Destabilizing | 0.95 | D | 0.633 | neutral | None | None | None | None | N |
S/W | 0.8029 | likely_pathogenic | 0.8283 | pathogenic | -0.932 | Destabilizing | 0.999 | D | 0.685 | prob.neutral | None | None | None | None | N |
S/Y | 0.5379 | ambiguous | 0.588 | pathogenic | -0.637 | Destabilizing | 0.996 | D | 0.689 | prob.neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.