Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 25908 | 77947;77948;77949 | chr2:178568410;178568409;178568408 | chr2:179433137;179433136;179433135 |
N2AB | 24267 | 73024;73025;73026 | chr2:178568410;178568409;178568408 | chr2:179433137;179433136;179433135 |
N2A | 23340 | 70243;70244;70245 | chr2:178568410;178568409;178568408 | chr2:179433137;179433136;179433135 |
N2B | 16843 | 50752;50753;50754 | chr2:178568410;178568409;178568408 | chr2:179433137;179433136;179433135 |
Novex-1 | 16968 | 51127;51128;51129 | chr2:178568410;178568409;178568408 | chr2:179433137;179433136;179433135 |
Novex-2 | 17035 | 51328;51329;51330 | chr2:178568410;178568409;178568408 | chr2:179433137;179433136;179433135 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/N | None | None | 0.879 | N | 0.83 | 0.503 | 0.840766441124 | gnomAD-4.0.0 | 9.5822E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.25946E-05 | 0 | 0 |
I/V | None | None | 0.001 | N | 0.195 | 0.091 | 0.378498632473 | gnomAD-4.0.0 | 1.20033E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 6.17284E-04 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.6024 | likely_pathogenic | 0.6479 | pathogenic | -3.026 | Highly Destabilizing | 0.218 | N | 0.699 | prob.neutral | None | None | None | None | N |
I/C | 0.7447 | likely_pathogenic | 0.718 | pathogenic | -2.652 | Highly Destabilizing | 0.973 | D | 0.785 | deleterious | None | None | None | None | N |
I/D | 0.9967 | likely_pathogenic | 0.9979 | pathogenic | -3.268 | Highly Destabilizing | 0.906 | D | 0.833 | deleterious | None | None | None | None | N |
I/E | 0.9921 | likely_pathogenic | 0.9949 | pathogenic | -2.951 | Highly Destabilizing | 0.906 | D | 0.819 | deleterious | None | None | None | None | N |
I/F | 0.4846 | ambiguous | 0.5057 | ambiguous | -1.935 | Destabilizing | 0.782 | D | 0.708 | prob.delet. | N | 0.478956563 | None | None | N |
I/G | 0.9582 | likely_pathogenic | 0.9659 | pathogenic | -3.625 | Highly Destabilizing | 0.906 | D | 0.797 | deleterious | None | None | None | None | N |
I/H | 0.9881 | likely_pathogenic | 0.9921 | pathogenic | -3.202 | Highly Destabilizing | 0.991 | D | 0.811 | deleterious | None | None | None | None | N |
I/K | 0.9861 | likely_pathogenic | 0.9907 | pathogenic | -2.191 | Highly Destabilizing | 0.826 | D | 0.803 | deleterious | None | None | None | None | N |
I/L | 0.1366 | likely_benign | 0.1326 | benign | -1.217 | Destabilizing | 0.031 | N | 0.416 | neutral | N | 0.445866555 | None | None | N |
I/M | 0.1192 | likely_benign | 0.1138 | benign | -1.624 | Destabilizing | 0.038 | N | 0.454 | neutral | N | 0.512038406 | None | None | N |
I/N | 0.9607 | likely_pathogenic | 0.9724 | pathogenic | -2.836 | Highly Destabilizing | 0.879 | D | 0.83 | deleterious | N | 0.511899843 | None | None | N |
I/P | 0.9964 | likely_pathogenic | 0.9973 | pathogenic | -1.812 | Destabilizing | 0.967 | D | 0.835 | deleterious | None | None | None | None | N |
I/Q | 0.9795 | likely_pathogenic | 0.9858 | pathogenic | -2.504 | Highly Destabilizing | 0.906 | D | 0.829 | deleterious | None | None | None | None | N |
I/R | 0.9774 | likely_pathogenic | 0.984 | pathogenic | -2.216 | Highly Destabilizing | 0.906 | D | 0.837 | deleterious | None | None | None | None | N |
I/S | 0.866 | likely_pathogenic | 0.8981 | pathogenic | -3.504 | Highly Destabilizing | 0.782 | D | 0.781 | deleterious | N | 0.500290048 | None | None | N |
I/T | 0.7539 | likely_pathogenic | 0.8168 | pathogenic | -3.014 | Highly Destabilizing | 0.338 | N | 0.779 | deleterious | N | 0.493453193 | None | None | N |
I/V | 0.0642 | likely_benign | 0.0621 | benign | -1.812 | Destabilizing | 0.001 | N | 0.195 | neutral | N | 0.371616726 | None | None | N |
I/W | 0.9903 | likely_pathogenic | 0.9926 | pathogenic | -2.157 | Highly Destabilizing | 0.991 | D | 0.807 | deleterious | None | None | None | None | N |
I/Y | 0.9546 | likely_pathogenic | 0.9619 | pathogenic | -2.03 | Highly Destabilizing | 0.906 | D | 0.826 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.