Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 25909 | 77950;77951;77952 | chr2:178568407;178568406;178568405 | chr2:179433134;179433133;179433132 |
N2AB | 24268 | 73027;73028;73029 | chr2:178568407;178568406;178568405 | chr2:179433134;179433133;179433132 |
N2A | 23341 | 70246;70247;70248 | chr2:178568407;178568406;178568405 | chr2:179433134;179433133;179433132 |
N2B | 16844 | 50755;50756;50757 | chr2:178568407;178568406;178568405 | chr2:179433134;179433133;179433132 |
Novex-1 | 16969 | 51130;51131;51132 | chr2:178568407;178568406;178568405 | chr2:179433134;179433133;179433132 |
Novex-2 | 17036 | 51331;51332;51333 | chr2:178568407;178568406;178568405 | chr2:179433134;179433133;179433132 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | None | None | 0.919 | N | 0.541 | 0.262 | 0.213573922156 | gnomAD-4.0.0 | 6.84454E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99628E-07 | 0 | 0 |
T/P | None | None | 0.998 | N | 0.761 | 0.459 | 0.457922657367 | gnomAD-4.0.0 | 1.36891E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.79926E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.1295 | likely_benign | 0.1368 | benign | -0.886 | Destabilizing | 0.919 | D | 0.541 | neutral | N | 0.471510597 | None | None | N |
T/C | 0.3205 | likely_benign | 0.2819 | benign | -1.037 | Destabilizing | 1.0 | D | 0.794 | deleterious | None | None | None | None | N |
T/D | 0.7569 | likely_pathogenic | 0.7869 | pathogenic | -1.652 | Destabilizing | 0.998 | D | 0.738 | prob.delet. | None | None | None | None | N |
T/E | 0.6263 | likely_pathogenic | 0.674 | pathogenic | -1.561 | Destabilizing | 0.995 | D | 0.718 | prob.delet. | None | None | None | None | N |
T/F | 0.278 | likely_benign | 0.2875 | benign | -0.989 | Destabilizing | 0.991 | D | 0.833 | deleterious | None | None | None | None | N |
T/G | 0.4175 | ambiguous | 0.4462 | ambiguous | -1.187 | Destabilizing | 0.995 | D | 0.733 | prob.delet. | None | None | None | None | N |
T/H | 0.3517 | ambiguous | 0.3579 | ambiguous | -1.49 | Destabilizing | 1.0 | D | 0.845 | deleterious | None | None | None | None | N |
T/I | 0.1174 | likely_benign | 0.1272 | benign | -0.154 | Destabilizing | 0.919 | D | 0.662 | neutral | N | 0.512614409 | None | None | N |
T/K | 0.4386 | ambiguous | 0.4842 | ambiguous | -0.721 | Destabilizing | 0.994 | D | 0.725 | prob.delet. | N | 0.47949954 | None | None | N |
T/L | 0.1002 | likely_benign | 0.1032 | benign | -0.154 | Destabilizing | 0.938 | D | 0.592 | neutral | None | None | None | None | N |
T/M | 0.0896 | likely_benign | 0.0871 | benign | 0.018 | Stabilizing | 0.999 | D | 0.797 | deleterious | None | None | None | None | N |
T/N | 0.1932 | likely_benign | 0.2096 | benign | -1.202 | Destabilizing | 0.998 | D | 0.695 | prob.neutral | None | None | None | None | N |
T/P | 0.7732 | likely_pathogenic | 0.8298 | pathogenic | -0.367 | Destabilizing | 0.998 | D | 0.761 | deleterious | N | 0.5116199 | None | None | N |
T/Q | 0.3793 | ambiguous | 0.3957 | ambiguous | -1.308 | Destabilizing | 0.998 | D | 0.798 | deleterious | None | None | None | None | N |
T/R | 0.3692 | ambiguous | 0.4023 | ambiguous | -0.593 | Destabilizing | 0.994 | D | 0.773 | deleterious | N | 0.479561993 | None | None | N |
T/S | 0.1406 | likely_benign | 0.1389 | benign | -1.318 | Destabilizing | 0.979 | D | 0.545 | neutral | N | 0.482502146 | None | None | N |
T/V | 0.0973 | likely_benign | 0.097 | benign | -0.367 | Destabilizing | 0.086 | N | 0.423 | neutral | None | None | None | None | N |
T/W | 0.7016 | likely_pathogenic | 0.6977 | pathogenic | -1.067 | Destabilizing | 1.0 | D | 0.824 | deleterious | None | None | None | None | N |
T/Y | 0.3521 | ambiguous | 0.3544 | ambiguous | -0.69 | Destabilizing | 0.995 | D | 0.84 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.