Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 25913 | 77962;77963;77964 | chr2:178568395;178568394;178568393 | chr2:179433122;179433121;179433120 |
N2AB | 24272 | 73039;73040;73041 | chr2:178568395;178568394;178568393 | chr2:179433122;179433121;179433120 |
N2A | 23345 | 70258;70259;70260 | chr2:178568395;178568394;178568393 | chr2:179433122;179433121;179433120 |
N2B | 16848 | 50767;50768;50769 | chr2:178568395;178568394;178568393 | chr2:179433122;179433121;179433120 |
Novex-1 | 16973 | 51142;51143;51144 | chr2:178568395;178568394;178568393 | chr2:179433122;179433121;179433120 |
Novex-2 | 17040 | 51343;51344;51345 | chr2:178568395;178568394;178568393 | chr2:179433122;179433121;179433120 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/I | None | None | 0.093 | N | 0.564 | 0.259 | 0.496495002422 | gnomAD-4.0.0 | 1.59264E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85997E-06 | 0 | 0 |
N/K | None | None | None | N | 0.119 | 0.11 | 0.0138822411134 | gnomAD-4.0.0 | 1.20033E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.31251E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/A | 0.1079 | likely_benign | 0.1201 | benign | -0.81 | Destabilizing | 0.016 | N | 0.349 | neutral | None | None | None | None | I |
N/C | 0.1578 | likely_benign | 0.1525 | benign | 0.067 | Stabilizing | 0.864 | D | 0.477 | neutral | None | None | None | None | I |
N/D | 0.0798 | likely_benign | 0.0876 | benign | -0.581 | Destabilizing | None | N | 0.11 | neutral | N | 0.405156083 | None | None | I |
N/E | 0.1153 | likely_benign | 0.1281 | benign | -0.497 | Destabilizing | None | N | 0.127 | neutral | None | None | None | None | I |
N/F | 0.2562 | likely_benign | 0.2879 | benign | -0.547 | Destabilizing | 0.356 | N | 0.488 | neutral | None | None | None | None | I |
N/G | 0.1654 | likely_benign | 0.185 | benign | -1.149 | Destabilizing | 0.031 | N | 0.335 | neutral | None | None | None | None | I |
N/H | 0.0839 | likely_benign | 0.0853 | benign | -0.948 | Destabilizing | 0.171 | N | 0.454 | neutral | N | 0.510150107 | None | None | I |
N/I | 0.1053 | likely_benign | 0.1207 | benign | 0.051 | Stabilizing | 0.093 | N | 0.564 | neutral | N | 0.485195734 | None | None | I |
N/K | 0.1436 | likely_benign | 0.1618 | benign | -0.384 | Destabilizing | None | N | 0.119 | neutral | N | 0.406540163 | None | None | I |
N/L | 0.0976 | likely_benign | 0.0984 | benign | 0.051 | Stabilizing | 0.038 | N | 0.464 | neutral | None | None | None | None | I |
N/M | 0.141 | likely_benign | 0.14 | benign | 0.495 | Stabilizing | 0.356 | N | 0.492 | neutral | None | None | None | None | I |
N/P | 0.6723 | likely_pathogenic | 0.7246 | pathogenic | -0.206 | Destabilizing | 0.136 | N | 0.575 | neutral | None | None | None | None | I |
N/Q | 0.128 | likely_benign | 0.1355 | benign | -0.901 | Destabilizing | None | N | 0.213 | neutral | None | None | None | None | I |
N/R | 0.2114 | likely_benign | 0.2439 | benign | -0.424 | Destabilizing | 0.038 | N | 0.317 | neutral | None | None | None | None | I |
N/S | 0.0719 | likely_benign | 0.0752 | benign | -0.894 | Destabilizing | 0.012 | N | 0.314 | neutral | N | 0.400459552 | None | None | I |
N/T | 0.0845 | likely_benign | 0.0931 | benign | -0.624 | Destabilizing | None | N | 0.145 | neutral | N | 0.428992948 | None | None | I |
N/V | 0.1147 | likely_benign | 0.1293 | benign | -0.206 | Destabilizing | 0.038 | N | 0.469 | neutral | None | None | None | None | I |
N/W | 0.5441 | ambiguous | 0.5853 | pathogenic | -0.339 | Destabilizing | 0.864 | D | 0.495 | neutral | None | None | None | None | I |
N/Y | 0.0991 | likely_benign | 0.1039 | benign | -0.148 | Destabilizing | 0.295 | N | 0.519 | neutral | N | 0.488505398 | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.