Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 25914 | 77965;77966;77967 | chr2:178568392;178568391;178568390 | chr2:179433119;179433118;179433117 |
N2AB | 24273 | 73042;73043;73044 | chr2:178568392;178568391;178568390 | chr2:179433119;179433118;179433117 |
N2A | 23346 | 70261;70262;70263 | chr2:178568392;178568391;178568390 | chr2:179433119;179433118;179433117 |
N2B | 16849 | 50770;50771;50772 | chr2:178568392;178568391;178568390 | chr2:179433119;179433118;179433117 |
Novex-1 | 16974 | 51145;51146;51147 | chr2:178568392;178568391;178568390 | chr2:179433119;179433118;179433117 |
Novex-2 | 17041 | 51346;51347;51348 | chr2:178568392;178568391;178568390 | chr2:179433119;179433118;179433117 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/R | rs774671830 | -1.107 | 0.989 | N | 0.884 | 0.485 | 0.652424105921 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 4.65E-05 | 0 | 0 |
P/R | rs774671830 | -1.107 | 0.989 | N | 0.884 | 0.485 | 0.652424105921 | gnomAD-4.0.0 | 1.59268E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 1.88445E-05 | 0 | 0 | 0 | 0 |
P/S | None | None | 0.989 | N | 0.808 | 0.439 | 0.465038187318 | gnomAD-4.0.0 | 1.20033E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.31251E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.0788 | likely_benign | 0.0872 | benign | -1.775 | Destabilizing | 0.928 | D | 0.66 | neutral | N | 0.504226999 | None | None | N |
P/C | 0.5663 | likely_pathogenic | 0.6154 | pathogenic | -1.16 | Destabilizing | 0.999 | D | 0.879 | deleterious | None | None | None | None | N |
P/D | 0.7314 | likely_pathogenic | 0.7838 | pathogenic | -1.89 | Destabilizing | 0.997 | D | 0.841 | deleterious | None | None | None | None | N |
P/E | 0.3633 | ambiguous | 0.3946 | ambiguous | -1.793 | Destabilizing | 0.992 | D | 0.822 | deleterious | None | None | None | None | N |
P/F | 0.6487 | likely_pathogenic | 0.7395 | pathogenic | -1.205 | Destabilizing | 0.991 | D | 0.878 | deleterious | None | None | None | None | N |
P/G | 0.5382 | ambiguous | 0.6021 | pathogenic | -2.178 | Highly Destabilizing | 0.992 | D | 0.828 | deleterious | None | None | None | None | N |
P/H | 0.3381 | likely_benign | 0.4008 | ambiguous | -1.664 | Destabilizing | 0.999 | D | 0.867 | deleterious | N | 0.518980642 | None | None | N |
P/I | 0.2686 | likely_benign | 0.3197 | benign | -0.716 | Destabilizing | 0.968 | D | 0.831 | deleterious | None | None | None | None | N |
P/K | 0.4284 | ambiguous | 0.466 | ambiguous | -1.597 | Destabilizing | 0.992 | D | 0.828 | deleterious | None | None | None | None | N |
P/L | 0.1423 | likely_benign | 0.177 | benign | -0.716 | Destabilizing | 0.085 | N | 0.567 | neutral | D | 0.525057028 | None | None | N |
P/M | 0.3162 | likely_benign | 0.3619 | ambiguous | -0.571 | Destabilizing | 0.996 | D | 0.871 | deleterious | None | None | None | None | N |
P/N | 0.554 | ambiguous | 0.6358 | pathogenic | -1.569 | Destabilizing | 0.997 | D | 0.887 | deleterious | None | None | None | None | N |
P/Q | 0.2065 | likely_benign | 0.243 | benign | -1.608 | Destabilizing | 0.997 | D | 0.873 | deleterious | None | None | None | None | N |
P/R | 0.3347 | likely_benign | 0.385 | ambiguous | -1.151 | Destabilizing | 0.989 | D | 0.884 | deleterious | N | 0.499292998 | None | None | N |
P/S | 0.1844 | likely_benign | 0.2253 | benign | -2.107 | Highly Destabilizing | 0.989 | D | 0.808 | deleterious | N | 0.492620727 | None | None | N |
P/T | 0.1405 | likely_benign | 0.1744 | benign | -1.884 | Destabilizing | 0.978 | D | 0.772 | deleterious | N | 0.502090928 | None | None | N |
P/V | 0.1957 | likely_benign | 0.2206 | benign | -1.038 | Destabilizing | 0.968 | D | 0.773 | deleterious | None | None | None | None | N |
P/W | 0.8721 | likely_pathogenic | 0.9044 | pathogenic | -1.508 | Destabilizing | 0.999 | D | 0.857 | deleterious | None | None | None | None | N |
P/Y | 0.642 | likely_pathogenic | 0.7164 | pathogenic | -1.184 | Destabilizing | 0.998 | D | 0.869 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.