Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 25922 | 77989;77990;77991 | chr2:178568368;178568367;178568366 | chr2:179433095;179433094;179433093 |
N2AB | 24281 | 73066;73067;73068 | chr2:178568368;178568367;178568366 | chr2:179433095;179433094;179433093 |
N2A | 23354 | 70285;70286;70287 | chr2:178568368;178568367;178568366 | chr2:179433095;179433094;179433093 |
N2B | 16857 | 50794;50795;50796 | chr2:178568368;178568367;178568366 | chr2:179433095;179433094;179433093 |
Novex-1 | 16982 | 51169;51170;51171 | chr2:178568368;178568367;178568366 | chr2:179433095;179433094;179433093 |
Novex-2 | 17049 | 51370;51371;51372 | chr2:178568368;178568367;178568366 | chr2:179433095;179433094;179433093 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Q/R | None | None | 0.684 | N | 0.514 | 0.211 | 0.168933306366 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 2.75482E-04 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Q/A | 0.1835 | likely_benign | 0.1777 | benign | -0.069 | Destabilizing | 0.543 | D | 0.519 | neutral | None | None | None | None | I |
Q/C | 0.7661 | likely_pathogenic | 0.7786 | pathogenic | 0.073 | Stabilizing | 0.996 | D | 0.56 | neutral | None | None | None | None | I |
Q/D | 0.5009 | ambiguous | 0.5399 | ambiguous | -0.046 | Destabilizing | 0.59 | D | 0.449 | neutral | None | None | None | None | I |
Q/E | 0.1391 | likely_benign | 0.1656 | benign | -0.095 | Destabilizing | 0.007 | N | 0.167 | neutral | N | 0.39651517 | None | None | I |
Q/F | 0.7893 | likely_pathogenic | 0.8154 | pathogenic | -0.424 | Destabilizing | 0.984 | D | 0.533 | neutral | None | None | None | None | I |
Q/G | 0.3657 | ambiguous | 0.3927 | ambiguous | -0.199 | Destabilizing | 0.742 | D | 0.561 | neutral | None | None | None | None | I |
Q/H | 0.2526 | likely_benign | 0.2895 | benign | -0.004 | Destabilizing | 0.939 | D | 0.449 | neutral | N | 0.467000692 | None | None | I |
Q/I | 0.4356 | ambiguous | 0.4726 | ambiguous | 0.175 | Stabilizing | 0.953 | D | 0.552 | neutral | None | None | None | None | I |
Q/K | 0.2019 | likely_benign | 0.2594 | benign | 0.079 | Stabilizing | 0.309 | N | 0.484 | neutral | N | 0.465953826 | None | None | I |
Q/L | 0.183 | likely_benign | 0.1959 | benign | 0.175 | Stabilizing | 0.684 | D | 0.551 | neutral | N | 0.512843696 | None | None | I |
Q/M | 0.3883 | ambiguous | 0.3983 | ambiguous | 0.207 | Stabilizing | 0.984 | D | 0.439 | neutral | None | None | None | None | I |
Q/N | 0.2727 | likely_benign | 0.2911 | benign | -0.119 | Destabilizing | 0.742 | D | 0.455 | neutral | None | None | None | None | I |
Q/P | 0.0873 | likely_benign | 0.084 | benign | 0.119 | Stabilizing | 0.003 | N | 0.162 | neutral | N | 0.387106253 | None | None | I |
Q/R | 0.221 | likely_benign | 0.2595 | benign | 0.28 | Stabilizing | 0.684 | D | 0.514 | neutral | N | 0.488350683 | None | None | I |
Q/S | 0.2023 | likely_benign | 0.1961 | benign | -0.123 | Destabilizing | 0.742 | D | 0.454 | neutral | None | None | None | None | I |
Q/T | 0.1999 | likely_benign | 0.2124 | benign | -0.042 | Destabilizing | 0.742 | D | 0.544 | neutral | None | None | None | None | I |
Q/V | 0.268 | likely_benign | 0.2762 | benign | 0.119 | Stabilizing | 0.854 | D | 0.523 | neutral | None | None | None | None | I |
Q/W | 0.7749 | likely_pathogenic | 0.8081 | pathogenic | -0.482 | Destabilizing | 0.996 | D | 0.635 | neutral | None | None | None | None | I |
Q/Y | 0.6038 | likely_pathogenic | 0.6601 | pathogenic | -0.192 | Destabilizing | 0.984 | D | 0.5 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.