Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 25925 | 77998;77999;78000 | chr2:178568359;178568358;178568357 | chr2:179433086;179433085;179433084 |
N2AB | 24284 | 73075;73076;73077 | chr2:178568359;178568358;178568357 | chr2:179433086;179433085;179433084 |
N2A | 23357 | 70294;70295;70296 | chr2:178568359;178568358;178568357 | chr2:179433086;179433085;179433084 |
N2B | 16860 | 50803;50804;50805 | chr2:178568359;178568358;178568357 | chr2:179433086;179433085;179433084 |
Novex-1 | 16985 | 51178;51179;51180 | chr2:178568359;178568358;178568357 | chr2:179433086;179433085;179433084 |
Novex-2 | 17052 | 51379;51380;51381 | chr2:178568359;178568358;178568357 | chr2:179433086;179433085;179433084 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/T | rs1048567784 | -0.812 | 0.999 | N | 0.589 | 0.524 | 0.378847511475 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 0 | 2.9E-05 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
N/T | rs1048567784 | -0.812 | 0.999 | N | 0.589 | 0.524 | 0.378847511475 | gnomAD-4.0.0 | 3.18464E-06 | None | None | None | None | N | None | 0 | 2.28843E-05 | None | 0 | 0 | None | 0 | 0 | 2.85976E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/A | 0.7618 | likely_pathogenic | 0.8158 | pathogenic | -1.046 | Destabilizing | 1.0 | D | 0.812 | deleterious | None | None | None | None | N |
N/C | 0.5978 | likely_pathogenic | 0.6203 | pathogenic | -0.361 | Destabilizing | 1.0 | D | 0.895 | deleterious | None | None | None | None | N |
N/D | 0.7982 | likely_pathogenic | 0.8662 | pathogenic | -1.365 | Destabilizing | 0.999 | D | 0.55 | neutral | N | 0.48075008 | None | None | N |
N/E | 0.9769 | likely_pathogenic | 0.9855 | pathogenic | -1.211 | Destabilizing | 0.999 | D | 0.608 | neutral | None | None | None | None | N |
N/F | 0.9763 | likely_pathogenic | 0.9864 | pathogenic | -0.732 | Destabilizing | 1.0 | D | 0.927 | deleterious | None | None | None | None | N |
N/G | 0.5218 | ambiguous | 0.5808 | pathogenic | -1.412 | Destabilizing | 0.999 | D | 0.521 | neutral | None | None | None | None | N |
N/H | 0.399 | ambiguous | 0.4822 | ambiguous | -1.018 | Destabilizing | 1.0 | D | 0.671 | neutral | N | 0.496066089 | None | None | N |
N/I | 0.9729 | likely_pathogenic | 0.9827 | pathogenic | -0.094 | Destabilizing | 1.0 | D | 0.923 | deleterious | N | 0.499868293 | None | None | N |
N/K | 0.9434 | likely_pathogenic | 0.9682 | pathogenic | -0.318 | Destabilizing | 1.0 | D | 0.648 | neutral | N | 0.467365859 | None | None | N |
N/L | 0.9224 | likely_pathogenic | 0.9428 | pathogenic | -0.094 | Destabilizing | 1.0 | D | 0.897 | deleterious | None | None | None | None | N |
N/M | 0.9511 | likely_pathogenic | 0.967 | pathogenic | 0.327 | Stabilizing | 1.0 | D | 0.89 | deleterious | None | None | None | None | N |
N/P | 0.9943 | likely_pathogenic | 0.9958 | pathogenic | -0.382 | Destabilizing | 1.0 | D | 0.915 | deleterious | None | None | None | None | N |
N/Q | 0.9029 | likely_pathogenic | 0.9341 | pathogenic | -1.087 | Destabilizing | 1.0 | D | 0.703 | prob.neutral | None | None | None | None | N |
N/R | 0.8994 | likely_pathogenic | 0.9314 | pathogenic | -0.331 | Destabilizing | 1.0 | D | 0.668 | neutral | None | None | None | None | N |
N/S | 0.1674 | likely_benign | 0.1908 | benign | -1.163 | Destabilizing | 0.999 | D | 0.521 | neutral | N | 0.480403203 | None | None | N |
N/T | 0.7499 | likely_pathogenic | 0.8108 | pathogenic | -0.816 | Destabilizing | 0.999 | D | 0.589 | neutral | N | 0.472925721 | None | None | N |
N/V | 0.9467 | likely_pathogenic | 0.9608 | pathogenic | -0.382 | Destabilizing | 1.0 | D | 0.912 | deleterious | None | None | None | None | N |
N/W | 0.9896 | likely_pathogenic | 0.9933 | pathogenic | -0.496 | Destabilizing | 1.0 | D | 0.859 | deleterious | None | None | None | None | N |
N/Y | 0.7509 | likely_pathogenic | 0.8293 | pathogenic | -0.229 | Destabilizing | 1.0 | D | 0.91 | deleterious | N | 0.468330591 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.