Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 2593 | 8002;8003;8004 | chr2:178773187;178773186;178773185 | chr2:179637914;179637913;179637912 |
N2AB | 2593 | 8002;8003;8004 | chr2:178773187;178773186;178773185 | chr2:179637914;179637913;179637912 |
N2A | 2593 | 8002;8003;8004 | chr2:178773187;178773186;178773185 | chr2:179637914;179637913;179637912 |
N2B | 2547 | 7864;7865;7866 | chr2:178773187;178773186;178773185 | chr2:179637914;179637913;179637912 |
Novex-1 | 2547 | 7864;7865;7866 | chr2:178773187;178773186;178773185 | chr2:179637914;179637913;179637912 |
Novex-2 | 2547 | 7864;7865;7866 | chr2:178773187;178773186;178773185 | chr2:179637914;179637913;179637912 |
Novex-3 | 2593 | 8002;8003;8004 | chr2:178773187;178773186;178773185 | chr2:179637914;179637913;179637912 |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/S | None | None | 0.625 | N | 0.472 | 0.196 | 0.165133752707 | gnomAD-4.0.0 | 1.59114E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 3.02261E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/A | 0.4501 | ambiguous | 0.4737 | ambiguous | -0.478 | Destabilizing | 0.842 | D | 0.443 | neutral | None | None | None | None | N |
N/C | 0.5152 | ambiguous | 0.5618 | ambiguous | 0.423 | Stabilizing | 0.998 | D | 0.53 | neutral | None | None | None | None | N |
N/D | 0.1714 | likely_benign | 0.1559 | benign | -0.441 | Destabilizing | 0.005 | N | 0.111 | neutral | N | 0.446593972 | None | None | N |
N/E | 0.5156 | ambiguous | 0.4969 | ambiguous | -0.425 | Destabilizing | 0.525 | D | 0.415 | neutral | None | None | None | None | N |
N/F | 0.7804 | likely_pathogenic | 0.7989 | pathogenic | -0.553 | Destabilizing | 0.991 | D | 0.501 | neutral | None | None | None | None | N |
N/G | 0.396 | ambiguous | 0.4141 | ambiguous | -0.741 | Destabilizing | 0.688 | D | 0.427 | neutral | None | None | None | None | N |
N/H | 0.1463 | likely_benign | 0.1574 | benign | -0.765 | Destabilizing | 0.989 | D | 0.403 | neutral | N | 0.517848941 | None | None | N |
N/I | 0.7052 | likely_pathogenic | 0.7123 | pathogenic | 0.154 | Stabilizing | 0.966 | D | 0.513 | neutral | D | 0.586288208 | None | None | N |
N/K | 0.4213 | ambiguous | 0.4302 | ambiguous | -0.152 | Destabilizing | 0.012 | N | 0.194 | neutral | N | 0.4557657 | None | None | N |
N/L | 0.4775 | ambiguous | 0.5072 | ambiguous | 0.154 | Stabilizing | 0.949 | D | 0.473 | neutral | None | None | None | None | N |
N/M | 0.6035 | likely_pathogenic | 0.6359 | pathogenic | 0.737 | Stabilizing | 0.998 | D | 0.476 | neutral | None | None | None | None | N |
N/P | 0.8635 | likely_pathogenic | 0.8583 | pathogenic | -0.028 | Destabilizing | 0.974 | D | 0.461 | neutral | None | None | None | None | N |
N/Q | 0.4404 | ambiguous | 0.4583 | ambiguous | -0.653 | Destabilizing | 0.949 | D | 0.374 | neutral | None | None | None | None | N |
N/R | 0.4612 | ambiguous | 0.4689 | ambiguous | -0.102 | Destabilizing | 0.728 | D | 0.403 | neutral | None | None | None | None | N |
N/S | 0.1419 | likely_benign | 0.1496 | benign | -0.439 | Destabilizing | 0.625 | D | 0.472 | neutral | N | 0.449293931 | None | None | N |
N/T | 0.3371 | likely_benign | 0.3532 | ambiguous | -0.268 | Destabilizing | 0.801 | D | 0.387 | neutral | N | 0.501143335 | None | None | N |
N/V | 0.6679 | likely_pathogenic | 0.6891 | pathogenic | -0.028 | Destabilizing | 0.974 | D | 0.477 | neutral | None | None | None | None | N |
N/W | 0.8741 | likely_pathogenic | 0.8937 | pathogenic | -0.452 | Destabilizing | 0.998 | D | 0.64 | neutral | None | None | None | None | N |
N/Y | 0.2546 | likely_benign | 0.2643 | benign | -0.227 | Destabilizing | 0.989 | D | 0.487 | neutral | D | 0.585552647 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.