Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 25940 | 78043;78044;78045 | chr2:178568314;178568313;178568312 | chr2:179433041;179433040;179433039 |
N2AB | 24299 | 73120;73121;73122 | chr2:178568314;178568313;178568312 | chr2:179433041;179433040;179433039 |
N2A | 23372 | 70339;70340;70341 | chr2:178568314;178568313;178568312 | chr2:179433041;179433040;179433039 |
N2B | 16875 | 50848;50849;50850 | chr2:178568314;178568313;178568312 | chr2:179433041;179433040;179433039 |
Novex-1 | 17000 | 51223;51224;51225 | chr2:178568314;178568313;178568312 | chr2:179433041;179433040;179433039 |
Novex-2 | 17067 | 51424;51425;51426 | chr2:178568314;178568313;178568312 | chr2:179433041;179433040;179433039 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/I | None | None | None | N | 0.161 | 0.047 | 0.233150807113 | gnomAD-4.0.0 | 1.59195E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 3.02572E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.1244 | likely_benign | 0.1446 | benign | -0.829 | Destabilizing | None | N | 0.152 | neutral | N | 0.475882818 | None | None | I |
V/C | 0.5809 | likely_pathogenic | 0.5759 | pathogenic | -0.644 | Destabilizing | 0.824 | D | 0.571 | neutral | None | None | None | None | I |
V/D | 0.2909 | likely_benign | 0.3515 | ambiguous | -0.684 | Destabilizing | 0.317 | N | 0.624 | neutral | N | 0.454950185 | None | None | I |
V/E | 0.2959 | likely_benign | 0.3235 | benign | -0.786 | Destabilizing | 0.149 | N | 0.596 | neutral | None | None | None | None | I |
V/F | 0.1787 | likely_benign | 0.2088 | benign | -0.921 | Destabilizing | 0.188 | N | 0.605 | neutral | N | 0.510766183 | None | None | I |
V/G | 0.2118 | likely_benign | 0.2483 | benign | -1.013 | Destabilizing | 0.062 | N | 0.558 | neutral | N | 0.506379083 | None | None | I |
V/H | 0.4636 | ambiguous | 0.5032 | ambiguous | -0.549 | Destabilizing | 0.935 | D | 0.608 | neutral | None | None | None | None | I |
V/I | 0.0639 | likely_benign | 0.0668 | benign | -0.476 | Destabilizing | None | N | 0.161 | neutral | N | 0.460222719 | None | None | I |
V/K | 0.3276 | likely_benign | 0.3469 | ambiguous | -0.73 | Destabilizing | 0.149 | N | 0.59 | neutral | None | None | None | None | I |
V/L | 0.1338 | likely_benign | 0.1419 | benign | -0.476 | Destabilizing | None | N | 0.139 | neutral | N | 0.473151944 | None | None | I |
V/M | 0.0948 | likely_benign | 0.0977 | benign | -0.349 | Destabilizing | 0.38 | N | 0.518 | neutral | None | None | None | None | I |
V/N | 0.1508 | likely_benign | 0.1825 | benign | -0.402 | Destabilizing | 0.38 | N | 0.625 | neutral | None | None | None | None | I |
V/P | 0.3773 | ambiguous | 0.4153 | ambiguous | -0.558 | Destabilizing | 0.555 | D | 0.613 | neutral | None | None | None | None | I |
V/Q | 0.2994 | likely_benign | 0.3118 | benign | -0.684 | Destabilizing | 0.555 | D | 0.605 | neutral | None | None | None | None | I |
V/R | 0.3204 | likely_benign | 0.34 | benign | -0.126 | Destabilizing | 0.38 | N | 0.62 | neutral | None | None | None | None | I |
V/S | 0.1421 | likely_benign | 0.1667 | benign | -0.792 | Destabilizing | 0.081 | N | 0.522 | neutral | None | None | None | None | I |
V/T | 0.0786 | likely_benign | 0.0922 | benign | -0.796 | Destabilizing | None | N | 0.141 | neutral | None | None | None | None | I |
V/W | 0.7469 | likely_pathogenic | 0.7716 | pathogenic | -0.999 | Destabilizing | 0.935 | D | 0.623 | neutral | None | None | None | None | I |
V/Y | 0.4383 | ambiguous | 0.4756 | ambiguous | -0.718 | Destabilizing | 0.555 | D | 0.585 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.