Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 25941 | 78046;78047;78048 | chr2:178568311;178568310;178568309 | chr2:179433038;179433037;179433036 |
N2AB | 24300 | 73123;73124;73125 | chr2:178568311;178568310;178568309 | chr2:179433038;179433037;179433036 |
N2A | 23373 | 70342;70343;70344 | chr2:178568311;178568310;178568309 | chr2:179433038;179433037;179433036 |
N2B | 16876 | 50851;50852;50853 | chr2:178568311;178568310;178568309 | chr2:179433038;179433037;179433036 |
Novex-1 | 17001 | 51226;51227;51228 | chr2:178568311;178568310;178568309 | chr2:179433038;179433037;179433036 |
Novex-2 | 17068 | 51427;51428;51429 | chr2:178568311;178568310;178568309 | chr2:179433038;179433037;179433036 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/I | rs928158833 | None | 0.981 | N | 0.445 | 0.208 | 0.594705806306 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | I | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
V/I | rs928158833 | None | 0.981 | N | 0.445 | 0.208 | 0.594705806306 | gnomAD-4.0.0 | 3.04526E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 3.61504E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.5173 | ambiguous | 0.5261 | ambiguous | -1.125 | Destabilizing | 0.998 | D | 0.483 | neutral | N | 0.478699392 | None | None | I |
V/C | 0.899 | likely_pathogenic | 0.9018 | pathogenic | -1.023 | Destabilizing | 1.0 | D | 0.787 | deleterious | None | None | None | None | I |
V/D | 0.9838 | likely_pathogenic | 0.9846 | pathogenic | -0.639 | Destabilizing | 1.0 | D | 0.828 | deleterious | D | 0.52439133 | None | None | I |
V/E | 0.9485 | likely_pathogenic | 0.9518 | pathogenic | -0.628 | Destabilizing | 1.0 | D | 0.793 | deleterious | None | None | None | None | I |
V/F | 0.6236 | likely_pathogenic | 0.614 | pathogenic | -0.778 | Destabilizing | 0.999 | D | 0.813 | deleterious | N | 0.505727189 | None | None | I |
V/G | 0.8675 | likely_pathogenic | 0.874 | pathogenic | -1.433 | Destabilizing | 1.0 | D | 0.793 | deleterious | D | 0.524644819 | None | None | I |
V/H | 0.9792 | likely_pathogenic | 0.9785 | pathogenic | -0.835 | Destabilizing | 1.0 | D | 0.799 | deleterious | None | None | None | None | I |
V/I | 0.0842 | likely_benign | 0.0828 | benign | -0.392 | Destabilizing | 0.981 | D | 0.445 | neutral | N | 0.467316633 | None | None | I |
V/K | 0.9752 | likely_pathogenic | 0.9767 | pathogenic | -1.006 | Destabilizing | 1.0 | D | 0.795 | deleterious | None | None | None | None | I |
V/L | 0.4947 | ambiguous | 0.4838 | ambiguous | -0.392 | Destabilizing | 0.434 | N | 0.276 | neutral | D | 0.523751336 | None | None | I |
V/M | 0.45 | ambiguous | 0.4404 | ambiguous | -0.484 | Destabilizing | 0.999 | D | 0.723 | prob.delet. | None | None | None | None | I |
V/N | 0.9402 | likely_pathogenic | 0.9394 | pathogenic | -0.932 | Destabilizing | 1.0 | D | 0.823 | deleterious | None | None | None | None | I |
V/P | 0.9737 | likely_pathogenic | 0.9803 | pathogenic | -0.6 | Destabilizing | 1.0 | D | 0.815 | deleterious | None | None | None | None | I |
V/Q | 0.9422 | likely_pathogenic | 0.9409 | pathogenic | -1.015 | Destabilizing | 1.0 | D | 0.815 | deleterious | None | None | None | None | I |
V/R | 0.9664 | likely_pathogenic | 0.9685 | pathogenic | -0.564 | Destabilizing | 1.0 | D | 0.822 | deleterious | None | None | None | None | I |
V/S | 0.7952 | likely_pathogenic | 0.7932 | pathogenic | -1.483 | Destabilizing | 1.0 | D | 0.779 | deleterious | None | None | None | None | I |
V/T | 0.6337 | likely_pathogenic | 0.6364 | pathogenic | -1.343 | Destabilizing | 0.998 | D | 0.527 | neutral | None | None | None | None | I |
V/W | 0.9918 | likely_pathogenic | 0.9922 | pathogenic | -0.946 | Destabilizing | 1.0 | D | 0.783 | deleterious | None | None | None | None | I |
V/Y | 0.9543 | likely_pathogenic | 0.9538 | pathogenic | -0.636 | Destabilizing | 1.0 | D | 0.818 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.