Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 25944 | 78055;78056;78057 | chr2:178568302;178568301;178568300 | chr2:179433029;179433028;179433027 |
N2AB | 24303 | 73132;73133;73134 | chr2:178568302;178568301;178568300 | chr2:179433029;179433028;179433027 |
N2A | 23376 | 70351;70352;70353 | chr2:178568302;178568301;178568300 | chr2:179433029;179433028;179433027 |
N2B | 16879 | 50860;50861;50862 | chr2:178568302;178568301;178568300 | chr2:179433029;179433028;179433027 |
Novex-1 | 17004 | 51235;51236;51237 | chr2:178568302;178568301;178568300 | chr2:179433029;179433028;179433027 |
Novex-2 | 17071 | 51436;51437;51438 | chr2:178568302;178568301;178568300 | chr2:179433029;179433028;179433027 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | None | None | 0.067 | N | 0.217 | 0.13 | 0.15556083564 | gnomAD-4.0.0 | 1.59192E-06 | None | None | None | None | I | None | 0 | 2.28749E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.1247 | likely_benign | 0.1143 | benign | -0.297 | Destabilizing | 0.067 | N | 0.217 | neutral | N | 0.48719589 | None | None | I |
T/C | 0.7424 | likely_pathogenic | 0.6942 | pathogenic | -0.162 | Destabilizing | 0.999 | D | 0.651 | neutral | None | None | None | None | I |
T/D | 0.9205 | likely_pathogenic | 0.9066 | pathogenic | 0.072 | Stabilizing | 0.995 | D | 0.685 | prob.neutral | None | None | None | None | I |
T/E | 0.8937 | likely_pathogenic | 0.8861 | pathogenic | -0.022 | Destabilizing | 0.991 | D | 0.671 | neutral | None | None | None | None | I |
T/F | 0.751 | likely_pathogenic | 0.7153 | pathogenic | -0.885 | Destabilizing | 0.995 | D | 0.679 | prob.neutral | None | None | None | None | I |
T/G | 0.5029 | ambiguous | 0.444 | ambiguous | -0.391 | Destabilizing | 0.938 | D | 0.589 | neutral | None | None | None | None | I |
T/H | 0.7327 | likely_pathogenic | 0.6925 | pathogenic | -0.712 | Destabilizing | 1.0 | D | 0.644 | neutral | None | None | None | None | I |
T/I | 0.6875 | likely_pathogenic | 0.7103 | pathogenic | -0.172 | Destabilizing | 0.988 | D | 0.687 | prob.neutral | N | 0.477902925 | None | None | I |
T/K | 0.7879 | likely_pathogenic | 0.786 | pathogenic | -0.257 | Destabilizing | 0.991 | D | 0.658 | neutral | None | None | None | None | I |
T/L | 0.3025 | likely_benign | 0.308 | benign | -0.172 | Destabilizing | 0.938 | D | 0.603 | neutral | None | None | None | None | I |
T/M | 0.1698 | likely_benign | 0.1708 | benign | 0.083 | Stabilizing | 1.0 | D | 0.659 | neutral | None | None | None | None | I |
T/N | 0.4129 | ambiguous | 0.3525 | ambiguous | -0.005 | Destabilizing | 0.994 | D | 0.67 | neutral | N | 0.486811887 | None | None | I |
T/P | 0.6577 | likely_pathogenic | 0.6383 | pathogenic | -0.187 | Destabilizing | 0.994 | D | 0.689 | prob.neutral | N | 0.461196886 | None | None | I |
T/Q | 0.6689 | likely_pathogenic | 0.6395 | pathogenic | -0.285 | Destabilizing | 0.995 | D | 0.679 | prob.neutral | None | None | None | None | I |
T/R | 0.7264 | likely_pathogenic | 0.7177 | pathogenic | 0.031 | Stabilizing | 0.995 | D | 0.672 | neutral | None | None | None | None | I |
T/S | 0.2404 | likely_benign | 0.2036 | benign | -0.196 | Destabilizing | 0.919 | D | 0.453 | neutral | N | 0.445789197 | None | None | I |
T/V | 0.4325 | ambiguous | 0.4285 | ambiguous | -0.187 | Destabilizing | 0.938 | D | 0.533 | neutral | None | None | None | None | I |
T/W | 0.9479 | likely_pathogenic | 0.9397 | pathogenic | -0.898 | Destabilizing | 1.0 | D | 0.7 | prob.neutral | None | None | None | None | I |
T/Y | 0.8052 | likely_pathogenic | 0.7652 | pathogenic | -0.602 | Destabilizing | 0.998 | D | 0.677 | prob.neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.