Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 25952 | 78079;78080;78081 | chr2:178568278;178568277;178568276 | chr2:179433005;179433004;179433003 |
N2AB | 24311 | 73156;73157;73158 | chr2:178568278;178568277;178568276 | chr2:179433005;179433004;179433003 |
N2A | 23384 | 70375;70376;70377 | chr2:178568278;178568277;178568276 | chr2:179433005;179433004;179433003 |
N2B | 16887 | 50884;50885;50886 | chr2:178568278;178568277;178568276 | chr2:179433005;179433004;179433003 |
Novex-1 | 17012 | 51259;51260;51261 | chr2:178568278;178568277;178568276 | chr2:179433005;179433004;179433003 |
Novex-2 | 17079 | 51460;51461;51462 | chr2:178568278;178568277;178568276 | chr2:179433005;179433004;179433003 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | None | None | 0.998 | D | 0.637 | 0.437 | 0.60773865089 | gnomAD-4.0.0 | 1.59176E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85922E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.4825 | ambiguous | 0.544 | ambiguous | -1.826 | Destabilizing | 0.998 | D | 0.637 | neutral | D | 0.526933288 | None | None | N |
V/C | 0.8822 | likely_pathogenic | 0.889 | pathogenic | -1.518 | Destabilizing | 1.0 | D | 0.807 | deleterious | None | None | None | None | N |
V/D | 0.9937 | likely_pathogenic | 0.9934 | pathogenic | -1.913 | Destabilizing | 1.0 | D | 0.824 | deleterious | None | None | None | None | N |
V/E | 0.9807 | likely_pathogenic | 0.9796 | pathogenic | -1.694 | Destabilizing | 1.0 | D | 0.811 | deleterious | D | 0.544757899 | None | None | N |
V/F | 0.657 | likely_pathogenic | 0.6079 | pathogenic | -1.086 | Destabilizing | 1.0 | D | 0.782 | deleterious | None | None | None | None | N |
V/G | 0.8371 | likely_pathogenic | 0.8575 | pathogenic | -2.373 | Highly Destabilizing | 1.0 | D | 0.833 | deleterious | D | 0.533401594 | None | None | N |
V/H | 0.9921 | likely_pathogenic | 0.9909 | pathogenic | -2.054 | Highly Destabilizing | 1.0 | D | 0.858 | deleterious | None | None | None | None | N |
V/I | 0.0883 | likely_benign | 0.0876 | benign | -0.317 | Destabilizing | 0.813 | D | 0.253 | neutral | None | None | None | None | N |
V/K | 0.9918 | likely_pathogenic | 0.9907 | pathogenic | -1.535 | Destabilizing | 1.0 | D | 0.815 | deleterious | None | None | None | None | N |
V/L | 0.5875 | likely_pathogenic | 0.5626 | ambiguous | -0.317 | Destabilizing | 0.981 | D | 0.627 | neutral | N | 0.466542938 | None | None | N |
V/M | 0.4938 | ambiguous | 0.4665 | ambiguous | -0.425 | Destabilizing | 0.999 | D | 0.766 | deleterious | N | 0.521373725 | None | None | N |
V/N | 0.9702 | likely_pathogenic | 0.9668 | pathogenic | -1.842 | Destabilizing | 1.0 | D | 0.877 | deleterious | None | None | None | None | N |
V/P | 0.9829 | likely_pathogenic | 0.9883 | pathogenic | -0.79 | Destabilizing | 1.0 | D | 0.822 | deleterious | None | None | None | None | N |
V/Q | 0.9798 | likely_pathogenic | 0.9775 | pathogenic | -1.642 | Destabilizing | 1.0 | D | 0.873 | deleterious | None | None | None | None | N |
V/R | 0.9869 | likely_pathogenic | 0.9861 | pathogenic | -1.455 | Destabilizing | 1.0 | D | 0.875 | deleterious | None | None | None | None | N |
V/S | 0.8628 | likely_pathogenic | 0.8776 | pathogenic | -2.542 | Highly Destabilizing | 1.0 | D | 0.816 | deleterious | None | None | None | None | N |
V/T | 0.7608 | likely_pathogenic | 0.7722 | pathogenic | -2.153 | Highly Destabilizing | 0.998 | D | 0.661 | neutral | None | None | None | None | N |
V/W | 0.9937 | likely_pathogenic | 0.9925 | pathogenic | -1.509 | Destabilizing | 1.0 | D | 0.848 | deleterious | None | None | None | None | N |
V/Y | 0.9622 | likely_pathogenic | 0.955 | pathogenic | -1.104 | Destabilizing | 1.0 | D | 0.784 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.