Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 25954 | 78085;78086;78087 | chr2:178568272;178568271;178568270 | chr2:179432999;179432998;179432997 |
N2AB | 24313 | 73162;73163;73164 | chr2:178568272;178568271;178568270 | chr2:179432999;179432998;179432997 |
N2A | 23386 | 70381;70382;70383 | chr2:178568272;178568271;178568270 | chr2:179432999;179432998;179432997 |
N2B | 16889 | 50890;50891;50892 | chr2:178568272;178568271;178568270 | chr2:179432999;179432998;179432997 |
Novex-1 | 17014 | 51265;51266;51267 | chr2:178568272;178568271;178568270 | chr2:179432999;179432998;179432997 |
Novex-2 | 17081 | 51466;51467;51468 | chr2:178568272;178568271;178568270 | chr2:179432999;179432998;179432997 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/Q | rs776215265 | 0.212 | 0.994 | N | 0.508 | 0.293 | 0.233785782151 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 3.27E-05 | None | 0 | 0 | 0 |
K/Q | rs776215265 | 0.212 | 0.994 | N | 0.508 | 0.293 | 0.233785782151 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 6.07533E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.6699 | likely_pathogenic | 0.6036 | pathogenic | 0.014 | Stabilizing | 0.985 | D | 0.47 | neutral | None | None | None | None | N |
K/C | 0.7896 | likely_pathogenic | 0.7239 | pathogenic | -0.432 | Destabilizing | 1.0 | D | 0.655 | neutral | None | None | None | None | N |
K/D | 0.8248 | likely_pathogenic | 0.7814 | pathogenic | -0.179 | Destabilizing | 0.942 | D | 0.467 | neutral | None | None | None | None | N |
K/E | 0.6528 | likely_pathogenic | 0.5882 | pathogenic | -0.192 | Destabilizing | 0.961 | D | 0.479 | neutral | N | 0.504103995 | None | None | N |
K/F | 0.9425 | likely_pathogenic | 0.9186 | pathogenic | -0.303 | Destabilizing | 0.999 | D | 0.615 | neutral | None | None | None | None | N |
K/G | 0.5817 | likely_pathogenic | 0.5047 | ambiguous | -0.122 | Destabilizing | 0.97 | D | 0.449 | neutral | None | None | None | None | N |
K/H | 0.3192 | likely_benign | 0.2498 | benign | -0.215 | Destabilizing | 0.996 | D | 0.493 | neutral | None | None | None | None | N |
K/I | 0.8593 | likely_pathogenic | 0.8142 | pathogenic | 0.286 | Stabilizing | 0.998 | D | 0.599 | neutral | N | 0.502306921 | None | None | N |
K/L | 0.7559 | likely_pathogenic | 0.6793 | pathogenic | 0.286 | Stabilizing | 0.985 | D | 0.45 | neutral | None | None | None | None | N |
K/M | 0.6694 | likely_pathogenic | 0.5942 | pathogenic | -0.031 | Destabilizing | 1.0 | D | 0.494 | neutral | None | None | None | None | N |
K/N | 0.6233 | likely_pathogenic | 0.5395 | ambiguous | 0.045 | Stabilizing | 0.122 | N | 0.151 | neutral | N | 0.421157325 | None | None | N |
K/P | 0.9176 | likely_pathogenic | 0.9081 | pathogenic | 0.219 | Stabilizing | 0.999 | D | 0.487 | neutral | None | None | None | None | N |
K/Q | 0.2896 | likely_benign | 0.2391 | benign | -0.115 | Destabilizing | 0.994 | D | 0.508 | neutral | N | 0.468945567 | None | None | N |
K/R | 0.0744 | likely_benign | 0.0669 | benign | -0.067 | Destabilizing | 0.98 | D | 0.471 | neutral | N | 0.444922406 | None | None | N |
K/S | 0.6775 | likely_pathogenic | 0.6072 | pathogenic | -0.361 | Destabilizing | 0.97 | D | 0.462 | neutral | None | None | None | None | N |
K/T | 0.5562 | ambiguous | 0.4878 | ambiguous | -0.252 | Destabilizing | 0.961 | D | 0.474 | neutral | N | 0.474794917 | None | None | N |
K/V | 0.7817 | likely_pathogenic | 0.7249 | pathogenic | 0.219 | Stabilizing | 0.999 | D | 0.465 | neutral | None | None | None | None | N |
K/W | 0.898 | likely_pathogenic | 0.8508 | pathogenic | -0.379 | Destabilizing | 1.0 | D | 0.708 | prob.delet. | None | None | None | None | N |
K/Y | 0.8148 | likely_pathogenic | 0.7467 | pathogenic | -0.026 | Destabilizing | 0.999 | D | 0.549 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.