Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 25964 | 78115;78116;78117 | chr2:178568242;178568241;178568240 | chr2:179432969;179432968;179432967 |
N2AB | 24323 | 73192;73193;73194 | chr2:178568242;178568241;178568240 | chr2:179432969;179432968;179432967 |
N2A | 23396 | 70411;70412;70413 | chr2:178568242;178568241;178568240 | chr2:179432969;179432968;179432967 |
N2B | 16899 | 50920;50921;50922 | chr2:178568242;178568241;178568240 | chr2:179432969;179432968;179432967 |
Novex-1 | 17024 | 51295;51296;51297 | chr2:178568242;178568241;178568240 | chr2:179432969;179432968;179432967 |
Novex-2 | 17091 | 51496;51497;51498 | chr2:178568242;178568241;178568240 | chr2:179432969;179432968;179432967 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/G | rs745748153 | -2.496 | 0.698 | D | 0.568 | 0.428 | 0.579660715472 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 3.27E-05 | None | 0 | 0 | 0 |
R/G | rs745748153 | -2.496 | 0.698 | D | 0.568 | 0.428 | 0.579660715472 | gnomAD-4.0.0 | 3.18347E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 2.86574E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/A | 0.8704 | likely_pathogenic | 0.862 | pathogenic | -2.192 | Highly Destabilizing | 0.559 | D | 0.596 | neutral | None | None | None | None | N |
R/C | 0.2696 | likely_benign | 0.2653 | benign | -1.959 | Destabilizing | 0.998 | D | 0.742 | deleterious | None | None | None | None | N |
R/D | 0.9887 | likely_pathogenic | 0.9882 | pathogenic | -1.48 | Destabilizing | 0.956 | D | 0.621 | neutral | None | None | None | None | N |
R/E | 0.8695 | likely_pathogenic | 0.8696 | pathogenic | -1.262 | Destabilizing | 0.754 | D | 0.561 | neutral | None | None | None | None | N |
R/F | 0.9355 | likely_pathogenic | 0.9312 | pathogenic | -1.186 | Destabilizing | 0.978 | D | 0.741 | deleterious | None | None | None | None | N |
R/G | 0.8637 | likely_pathogenic | 0.8552 | pathogenic | -2.493 | Highly Destabilizing | 0.698 | D | 0.568 | neutral | D | 0.554477909 | None | None | N |
R/H | 0.2686 | likely_benign | 0.259 | benign | -2.237 | Highly Destabilizing | 0.993 | D | 0.587 | neutral | None | None | None | None | N |
R/I | 0.7376 | likely_pathogenic | 0.7179 | pathogenic | -1.293 | Destabilizing | 0.97 | D | 0.738 | prob.delet. | D | 0.522384002 | None | None | N |
R/K | 0.1798 | likely_benign | 0.1484 | benign | -1.431 | Destabilizing | 0.014 | N | 0.355 | neutral | N | 0.485032949 | None | None | N |
R/L | 0.6802 | likely_pathogenic | 0.6586 | pathogenic | -1.293 | Destabilizing | 0.86 | D | 0.573 | neutral | None | None | None | None | N |
R/M | 0.6944 | likely_pathogenic | 0.6669 | pathogenic | -1.796 | Destabilizing | 0.998 | D | 0.666 | neutral | None | None | None | None | N |
R/N | 0.9452 | likely_pathogenic | 0.9404 | pathogenic | -1.701 | Destabilizing | 0.86 | D | 0.547 | neutral | None | None | None | None | N |
R/P | 0.9975 | likely_pathogenic | 0.9976 | pathogenic | -1.588 | Destabilizing | 0.978 | D | 0.689 | prob.neutral | None | None | None | None | N |
R/Q | 0.194 | likely_benign | 0.1938 | benign | -1.412 | Destabilizing | 0.956 | D | 0.569 | neutral | None | None | None | None | N |
R/S | 0.9021 | likely_pathogenic | 0.8979 | pathogenic | -2.375 | Highly Destabilizing | 0.058 | N | 0.463 | neutral | N | 0.514974035 | None | None | N |
R/T | 0.8145 | likely_pathogenic | 0.8126 | pathogenic | -1.97 | Destabilizing | 0.698 | D | 0.551 | neutral | N | 0.497630249 | None | None | N |
R/V | 0.7828 | likely_pathogenic | 0.7673 | pathogenic | -1.588 | Destabilizing | 0.956 | D | 0.668 | neutral | None | None | None | None | N |
R/W | 0.671 | likely_pathogenic | 0.6682 | pathogenic | -0.819 | Destabilizing | 0.998 | D | 0.72 | prob.delet. | None | None | None | None | N |
R/Y | 0.8408 | likely_pathogenic | 0.8309 | pathogenic | -0.783 | Destabilizing | 0.993 | D | 0.709 | prob.delet. | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.