Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 25968 | 78127;78128;78129 | chr2:178568230;178568229;178568228 | chr2:179432957;179432956;179432955 |
N2AB | 24327 | 73204;73205;73206 | chr2:178568230;178568229;178568228 | chr2:179432957;179432956;179432955 |
N2A | 23400 | 70423;70424;70425 | chr2:178568230;178568229;178568228 | chr2:179432957;179432956;179432955 |
N2B | 16903 | 50932;50933;50934 | chr2:178568230;178568229;178568228 | chr2:179432957;179432956;179432955 |
Novex-1 | 17028 | 51307;51308;51309 | chr2:178568230;178568229;178568228 | chr2:179432957;179432956;179432955 |
Novex-2 | 17095 | 51508;51509;51510 | chr2:178568230;178568229;178568228 | chr2:179432957;179432956;179432955 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/K | rs756933390 | -0.181 | 1.0 | N | 0.548 | 0.327 | None | gnomAD-2.1.1 | 1.61E-05 | None | None | None | None | I | None | 0 | 0 | None | 0 | 1.67168E-04 | None | 0 | None | 0 | 8.88E-06 | 0 |
E/K | rs756933390 | -0.181 | 1.0 | N | 0.548 | 0.327 | None | gnomAD-4.0.0 | 1.98445E-05 | None | None | None | None | I | None | 0 | 0 | None | 0 | 7.56048E-05 | None | 0 | 0 | 2.33892E-05 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.4115 | ambiguous | 0.396 | ambiguous | -0.646 | Destabilizing | 0.999 | D | 0.679 | prob.neutral | N | 0.482343015 | None | None | I |
E/C | 0.9474 | likely_pathogenic | 0.9379 | pathogenic | -0.505 | Destabilizing | 1.0 | D | 0.862 | deleterious | None | None | None | None | I |
E/D | 0.8532 | likely_pathogenic | 0.8629 | pathogenic | -1.428 | Destabilizing | 0.999 | D | 0.465 | neutral | N | 0.503298107 | None | None | I |
E/F | 0.9691 | likely_pathogenic | 0.9707 | pathogenic | -0.933 | Destabilizing | 1.0 | D | 0.885 | deleterious | None | None | None | None | I |
E/G | 0.6151 | likely_pathogenic | 0.6189 | pathogenic | -0.965 | Destabilizing | 1.0 | D | 0.773 | deleterious | D | 0.532758667 | None | None | I |
E/H | 0.8972 | likely_pathogenic | 0.9061 | pathogenic | -1.194 | Destabilizing | 1.0 | D | 0.703 | prob.neutral | None | None | None | None | I |
E/I | 0.7383 | likely_pathogenic | 0.6616 | pathogenic | 0.206 | Stabilizing | 1.0 | D | 0.891 | deleterious | None | None | None | None | I |
E/K | 0.4354 | ambiguous | 0.4574 | ambiguous | -0.653 | Destabilizing | 1.0 | D | 0.548 | neutral | N | 0.480888211 | None | None | I |
E/L | 0.8574 | likely_pathogenic | 0.8439 | pathogenic | 0.206 | Stabilizing | 1.0 | D | 0.867 | deleterious | None | None | None | None | I |
E/M | 0.7562 | likely_pathogenic | 0.7123 | pathogenic | 0.677 | Stabilizing | 1.0 | D | 0.849 | deleterious | None | None | None | None | I |
E/N | 0.8365 | likely_pathogenic | 0.8426 | pathogenic | -0.929 | Destabilizing | 1.0 | D | 0.747 | deleterious | None | None | None | None | I |
E/P | 0.9984 | likely_pathogenic | 0.9981 | pathogenic | -0.056 | Destabilizing | 1.0 | D | 0.836 | deleterious | None | None | None | None | I |
E/Q | 0.1989 | likely_benign | 0.1944 | benign | -0.812 | Destabilizing | 1.0 | D | 0.63 | neutral | N | 0.473050625 | None | None | I |
E/R | 0.6125 | likely_pathogenic | 0.6313 | pathogenic | -0.68 | Destabilizing | 1.0 | D | 0.747 | deleterious | None | None | None | None | I |
E/S | 0.5618 | ambiguous | 0.5512 | ambiguous | -1.321 | Destabilizing | 0.999 | D | 0.608 | neutral | None | None | None | None | I |
E/T | 0.5998 | likely_pathogenic | 0.5434 | ambiguous | -1.037 | Destabilizing | 1.0 | D | 0.821 | deleterious | None | None | None | None | I |
E/V | 0.4935 | ambiguous | 0.4104 | ambiguous | -0.056 | Destabilizing | 1.0 | D | 0.841 | deleterious | N | 0.477125251 | None | None | I |
E/W | 0.993 | likely_pathogenic | 0.993 | pathogenic | -1.065 | Destabilizing | 1.0 | D | 0.865 | deleterious | None | None | None | None | I |
E/Y | 0.9642 | likely_pathogenic | 0.9644 | pathogenic | -0.74 | Destabilizing | 1.0 | D | 0.862 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.