Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 25971 | 78136;78137;78138 | chr2:178568221;178568220;178568219 | chr2:179432948;179432947;179432946 |
N2AB | 24330 | 73213;73214;73215 | chr2:178568221;178568220;178568219 | chr2:179432948;179432947;179432946 |
N2A | 23403 | 70432;70433;70434 | chr2:178568221;178568220;178568219 | chr2:179432948;179432947;179432946 |
N2B | 16906 | 50941;50942;50943 | chr2:178568221;178568220;178568219 | chr2:179432948;179432947;179432946 |
Novex-1 | 17031 | 51316;51317;51318 | chr2:178568221;178568220;178568219 | chr2:179432948;179432947;179432946 |
Novex-2 | 17098 | 51517;51518;51519 | chr2:178568221;178568220;178568219 | chr2:179432948;179432947;179432946 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/H | rs1432174919 | 0.057 | 0.999 | N | 0.595 | 0.41 | 0.297375071883 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.88E-06 | 0 |
Y/H | rs1432174919 | 0.057 | 0.999 | N | 0.595 | 0.41 | 0.297375071883 | gnomAD-4.0.0 | 1.02644E-05 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.16947E-05 | 0 | 3.31422E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/A | 0.982 | likely_pathogenic | 0.9763 | pathogenic | -0.568 | Destabilizing | 0.996 | D | 0.652 | neutral | None | None | None | None | I |
Y/C | 0.7268 | likely_pathogenic | 0.6477 | pathogenic | 0.25 | Stabilizing | 1.0 | D | 0.702 | prob.neutral | N | 0.520500387 | None | None | I |
Y/D | 0.9811 | likely_pathogenic | 0.9786 | pathogenic | 0.783 | Stabilizing | 0.999 | D | 0.709 | prob.delet. | N | 0.496470798 | None | None | I |
Y/E | 0.9945 | likely_pathogenic | 0.9931 | pathogenic | 0.759 | Stabilizing | 1.0 | D | 0.684 | prob.neutral | None | None | None | None | I |
Y/F | 0.1481 | likely_benign | 0.1397 | benign | -0.308 | Destabilizing | 0.989 | D | 0.537 | neutral | N | 0.459721287 | None | None | I |
Y/G | 0.9641 | likely_pathogenic | 0.9559 | pathogenic | -0.751 | Destabilizing | 1.0 | D | 0.686 | prob.neutral | None | None | None | None | I |
Y/H | 0.8067 | likely_pathogenic | 0.7721 | pathogenic | 0.244 | Stabilizing | 0.999 | D | 0.595 | neutral | N | 0.467454764 | None | None | I |
Y/I | 0.9579 | likely_pathogenic | 0.9553 | pathogenic | -0.111 | Destabilizing | 0.983 | D | 0.647 | neutral | None | None | None | None | I |
Y/K | 0.9865 | likely_pathogenic | 0.9843 | pathogenic | 0.287 | Stabilizing | 1.0 | D | 0.685 | prob.neutral | None | None | None | None | I |
Y/L | 0.8925 | likely_pathogenic | 0.8917 | pathogenic | -0.111 | Destabilizing | 0.269 | N | 0.451 | neutral | None | None | None | None | I |
Y/M | 0.9622 | likely_pathogenic | 0.9554 | pathogenic | -0.011 | Destabilizing | 0.998 | D | 0.636 | neutral | None | None | None | None | I |
Y/N | 0.9041 | likely_pathogenic | 0.8752 | pathogenic | 0.113 | Stabilizing | 0.999 | D | 0.693 | prob.neutral | N | 0.473847092 | None | None | I |
Y/P | 0.9974 | likely_pathogenic | 0.9971 | pathogenic | -0.244 | Destabilizing | 1.0 | D | 0.707 | prob.neutral | None | None | None | None | I |
Y/Q | 0.985 | likely_pathogenic | 0.9797 | pathogenic | 0.148 | Stabilizing | 1.0 | D | 0.643 | neutral | None | None | None | None | I |
Y/R | 0.9641 | likely_pathogenic | 0.9571 | pathogenic | 0.513 | Stabilizing | 1.0 | D | 0.693 | prob.neutral | None | None | None | None | I |
Y/S | 0.9445 | likely_pathogenic | 0.9325 | pathogenic | -0.261 | Destabilizing | 0.999 | D | 0.667 | neutral | N | 0.479380501 | None | None | I |
Y/T | 0.9854 | likely_pathogenic | 0.9845 | pathogenic | -0.193 | Destabilizing | 0.999 | D | 0.653 | neutral | None | None | None | None | I |
Y/V | 0.9204 | likely_pathogenic | 0.9127 | pathogenic | -0.244 | Destabilizing | 0.983 | D | 0.636 | neutral | None | None | None | None | I |
Y/W | 0.7386 | likely_pathogenic | 0.7166 | pathogenic | -0.467 | Destabilizing | 1.0 | D | 0.583 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.