Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 25978 | 78157;78158;78159 | chr2:178568200;178568199;178568198 | chr2:179432927;179432926;179432925 |
N2AB | 24337 | 73234;73235;73236 | chr2:178568200;178568199;178568198 | chr2:179432927;179432926;179432925 |
N2A | 23410 | 70453;70454;70455 | chr2:178568200;178568199;178568198 | chr2:179432927;179432926;179432925 |
N2B | 16913 | 50962;50963;50964 | chr2:178568200;178568199;178568198 | chr2:179432927;179432926;179432925 |
Novex-1 | 17038 | 51337;51338;51339 | chr2:178568200;178568199;178568198 | chr2:179432927;179432926;179432925 |
Novex-2 | 17105 | 51538;51539;51540 | chr2:178568200;178568199;178568198 | chr2:179432927;179432926;179432925 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/D | rs1025712241 | None | None | N | 0.109 | 0.084 | 0.0954503805726 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
E/D | rs1025712241 | None | None | N | 0.109 | 0.084 | 0.0954503805726 | gnomAD-4.0.0 | 6.57886E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.47106E-05 | 0 | 0 |
E/G | None | None | 0.361 | N | 0.508 | 0.175 | 0.326881540566 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
E/Q | rs767541275 | 0.451 | 0.361 | N | 0.541 | 0.186 | 0.285698343383 | gnomAD-2.1.1 | 8.04E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 1.11346E-04 | None | 0 | None | 0 | 0 | 0 |
E/Q | rs767541275 | 0.451 | 0.361 | N | 0.541 | 0.186 | 0.285698343383 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
E/Q | rs767541275 | 0.451 | 0.361 | N | 0.541 | 0.186 | 0.285698343383 | gnomAD-4.0.0 | 7.68984E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 4.85178E-05 | None | 0 | 0 | 7.18267E-06 | 1.34034E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.1607 | likely_benign | 0.1825 | benign | -0.902 | Destabilizing | 0.104 | N | 0.422 | neutral | N | 0.482094704 | None | None | N |
E/C | 0.7591 | likely_pathogenic | 0.7757 | pathogenic | -0.443 | Destabilizing | 0.984 | D | 0.524 | neutral | None | None | None | None | N |
E/D | 0.0921 | likely_benign | 0.0889 | benign | -0.973 | Destabilizing | None | N | 0.109 | neutral | N | 0.477067401 | None | None | N |
E/F | 0.6449 | likely_pathogenic | 0.6788 | pathogenic | -0.133 | Destabilizing | 0.724 | D | 0.51 | neutral | None | None | None | None | N |
E/G | 0.2575 | likely_benign | 0.2855 | benign | -1.285 | Destabilizing | 0.361 | N | 0.508 | neutral | N | 0.500389997 | None | None | N |
E/H | 0.4931 | ambiguous | 0.5418 | ambiguous | -0.244 | Destabilizing | 0.942 | D | 0.465 | neutral | None | None | None | None | N |
E/I | 0.2143 | likely_benign | 0.2289 | benign | 0.153 | Stabilizing | 0.272 | N | 0.54 | neutral | None | None | None | None | N |
E/K | 0.2884 | likely_benign | 0.3365 | benign | -0.414 | Destabilizing | 0.361 | N | 0.417 | neutral | D | 0.524935919 | None | None | N |
E/L | 0.274 | likely_benign | 0.309 | benign | 0.153 | Stabilizing | 0.272 | N | 0.543 | neutral | None | None | None | None | N |
E/M | 0.3747 | ambiguous | 0.4042 | ambiguous | 0.551 | Stabilizing | 0.953 | D | 0.514 | neutral | None | None | None | None | N |
E/N | 0.1992 | likely_benign | 0.2199 | benign | -1.048 | Destabilizing | 0.272 | N | 0.465 | neutral | None | None | None | None | N |
E/P | 0.4448 | ambiguous | 0.524 | ambiguous | -0.178 | Destabilizing | 0.842 | D | 0.508 | neutral | None | None | None | None | N |
E/Q | 0.1816 | likely_benign | 0.2035 | benign | -0.896 | Destabilizing | 0.361 | N | 0.541 | neutral | N | 0.508427672 | None | None | N |
E/R | 0.4368 | ambiguous | 0.4952 | ambiguous | -0.062 | Destabilizing | 0.842 | D | 0.508 | neutral | None | None | None | None | N |
E/S | 0.1936 | likely_benign | 0.2087 | benign | -1.366 | Destabilizing | 0.272 | N | 0.381 | neutral | None | None | None | None | N |
E/T | 0.1623 | likely_benign | 0.1751 | benign | -1.035 | Destabilizing | 0.428 | N | 0.423 | neutral | None | None | None | None | N |
E/V | 0.1277 | likely_benign | 0.1375 | benign | -0.178 | Destabilizing | 0.001 | N | 0.315 | neutral | N | 0.513585562 | None | None | N |
E/W | 0.8949 | likely_pathogenic | 0.9076 | pathogenic | 0.221 | Stabilizing | 0.984 | D | 0.61 | neutral | None | None | None | None | N |
E/Y | 0.5559 | ambiguous | 0.596 | pathogenic | 0.168 | Stabilizing | 0.842 | D | 0.529 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.