Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 2598 | 8017;8018;8019 | chr2:178773172;178773171;178773170 | chr2:179637899;179637898;179637897 |
N2AB | 2598 | 8017;8018;8019 | chr2:178773172;178773171;178773170 | chr2:179637899;179637898;179637897 |
N2A | 2598 | 8017;8018;8019 | chr2:178773172;178773171;178773170 | chr2:179637899;179637898;179637897 |
N2B | 2552 | 7879;7880;7881 | chr2:178773172;178773171;178773170 | chr2:179637899;179637898;179637897 |
Novex-1 | 2552 | 7879;7880;7881 | chr2:178773172;178773171;178773170 | chr2:179637899;179637898;179637897 |
Novex-2 | 2552 | 7879;7880;7881 | chr2:178773172;178773171;178773170 | chr2:179637899;179637898;179637897 |
Novex-3 | 2598 | 8017;8018;8019 | chr2:178773172;178773171;178773170 | chr2:179637899;179637898;179637897 |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/V | None | None | 0.984 | D | 0.833 | 0.874 | 0.805222711834 | gnomAD-4.0.0 | 8.4028E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 9.18809E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/A | 0.7024 | likely_pathogenic | 0.7079 | pathogenic | -0.145 | Destabilizing | 0.896 | D | 0.772 | deleterious | D | 0.711650531 | None | None | N |
D/C | 0.9297 | likely_pathogenic | 0.9297 | pathogenic | -0.2 | Destabilizing | 0.999 | D | 0.821 | deleterious | None | None | None | None | N |
D/E | 0.2937 | likely_benign | 0.3325 | benign | -0.851 | Destabilizing | 0.011 | N | 0.289 | neutral | D | 0.540068348 | None | None | N |
D/F | 0.9676 | likely_pathogenic | 0.9642 | pathogenic | 0.459 | Stabilizing | 0.996 | D | 0.837 | deleterious | None | None | None | None | N |
D/G | 0.8061 | likely_pathogenic | 0.8093 | pathogenic | -0.57 | Destabilizing | 0.896 | D | 0.722 | prob.delet. | D | 0.710916294 | None | None | N |
D/H | 0.7789 | likely_pathogenic | 0.7853 | pathogenic | -0.061 | Destabilizing | 0.984 | D | 0.774 | deleterious | D | 0.651986299 | None | None | N |
D/I | 0.9217 | likely_pathogenic | 0.9055 | pathogenic | 0.994 | Stabilizing | 0.988 | D | 0.842 | deleterious | None | None | None | None | N |
D/K | 0.8627 | likely_pathogenic | 0.8566 | pathogenic | -0.657 | Destabilizing | 0.851 | D | 0.731 | prob.delet. | None | None | None | None | N |
D/L | 0.9362 | likely_pathogenic | 0.9294 | pathogenic | 0.994 | Stabilizing | 0.976 | D | 0.833 | deleterious | None | None | None | None | N |
D/M | 0.9472 | likely_pathogenic | 0.947 | pathogenic | 1.415 | Stabilizing | 0.999 | D | 0.825 | deleterious | None | None | None | None | N |
D/N | 0.4236 | ambiguous | 0.4526 | ambiguous | -1.168 | Destabilizing | 0.103 | N | 0.403 | neutral | D | 0.713085206 | None | None | N |
D/P | 0.9959 | likely_pathogenic | 0.9945 | pathogenic | 0.642 | Stabilizing | 0.988 | D | 0.797 | deleterious | None | None | None | None | N |
D/Q | 0.7708 | likely_pathogenic | 0.7811 | pathogenic | -0.884 | Destabilizing | 0.851 | D | 0.73 | prob.delet. | None | None | None | None | N |
D/R | 0.904 | likely_pathogenic | 0.8943 | pathogenic | -0.513 | Destabilizing | 0.976 | D | 0.817 | deleterious | None | None | None | None | N |
D/S | 0.5778 | likely_pathogenic | 0.5959 | pathogenic | -1.45 | Destabilizing | 0.919 | D | 0.673 | neutral | None | None | None | None | N |
D/T | 0.8052 | likely_pathogenic | 0.795 | pathogenic | -1.09 | Destabilizing | 0.919 | D | 0.761 | deleterious | None | None | None | None | N |
D/V | 0.8111 | likely_pathogenic | 0.7885 | pathogenic | 0.642 | Stabilizing | 0.984 | D | 0.833 | deleterious | D | 0.710928823 | None | None | N |
D/W | 0.9915 | likely_pathogenic | 0.9898 | pathogenic | 0.505 | Stabilizing | 0.999 | D | 0.81 | deleterious | None | None | None | None | N |
D/Y | 0.7826 | likely_pathogenic | 0.76 | pathogenic | 0.642 | Stabilizing | 0.995 | D | 0.835 | deleterious | D | 0.711002424 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.