Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 25980 | 78163;78164;78165 | chr2:178568194;178568193;178568192 | chr2:179432921;179432920;179432919 |
N2AB | 24339 | 73240;73241;73242 | chr2:178568194;178568193;178568192 | chr2:179432921;179432920;179432919 |
N2A | 23412 | 70459;70460;70461 | chr2:178568194;178568193;178568192 | chr2:179432921;179432920;179432919 |
N2B | 16915 | 50968;50969;50970 | chr2:178568194;178568193;178568192 | chr2:179432921;179432920;179432919 |
Novex-1 | 17040 | 51343;51344;51345 | chr2:178568194;178568193;178568192 | chr2:179432921;179432920;179432919 |
Novex-2 | 17107 | 51544;51545;51546 | chr2:178568194;178568193;178568192 | chr2:179432921;179432920;179432919 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/E | rs977275961 | 0.093 | None | N | 0.081 | 0.086 | 0.0401082797425 | gnomAD-2.1.1 | 3.19E-05 | None | None | None | None | N | None | 1.14811E-04 | 0 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
D/E | rs977275961 | 0.093 | None | N | 0.081 | 0.086 | 0.0401082797425 | gnomAD-3.1.2 | 1.32E-05 | None | None | None | None | N | None | 4.83E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
D/E | rs977275961 | 0.093 | None | N | 0.081 | 0.086 | 0.0401082797425 | gnomAD-4.0.0 | 1.31574E-05 | None | None | None | None | N | None | 4.82882E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/A | 0.0666 | likely_benign | 0.0682 | benign | -0.252 | Destabilizing | None | N | 0.355 | neutral | N | 0.482651288 | None | None | N |
D/C | 0.2849 | likely_benign | 0.2791 | benign | -0.239 | Destabilizing | 0.747 | D | 0.449 | neutral | None | None | None | None | N |
D/E | 0.0665 | likely_benign | 0.0613 | benign | -0.314 | Destabilizing | None | N | 0.081 | neutral | N | 0.387700899 | None | None | N |
D/F | 0.2906 | likely_benign | 0.3164 | benign | 0.137 | Stabilizing | 0.204 | N | 0.492 | neutral | None | None | None | None | N |
D/G | 0.1004 | likely_benign | 0.1016 | benign | -0.501 | Destabilizing | 0.006 | N | 0.391 | neutral | N | 0.46374024 | None | None | N |
D/H | 0.1291 | likely_benign | 0.1365 | benign | 0.403 | Stabilizing | 0.087 | N | 0.446 | neutral | N | 0.48914019 | None | None | N |
D/I | 0.1145 | likely_benign | 0.1193 | benign | 0.373 | Stabilizing | 0.112 | N | 0.569 | neutral | None | None | None | None | N |
D/K | 0.1015 | likely_benign | 0.1064 | benign | 0.18 | Stabilizing | 0.007 | N | 0.425 | neutral | None | None | None | None | N |
D/L | 0.1206 | likely_benign | 0.1269 | benign | 0.373 | Stabilizing | 0.035 | N | 0.533 | neutral | None | None | None | None | N |
D/M | 0.2099 | likely_benign | 0.2104 | benign | 0.336 | Stabilizing | 0.492 | N | 0.447 | neutral | None | None | None | None | N |
D/N | 0.0659 | likely_benign | 0.0663 | benign | -0.329 | Destabilizing | None | N | 0.209 | neutral | N | 0.496794021 | None | None | N |
D/P | 0.1785 | likely_benign | 0.1886 | benign | 0.188 | Stabilizing | 0.068 | N | 0.559 | neutral | None | None | None | None | N |
D/Q | 0.1049 | likely_benign | 0.1037 | benign | -0.23 | Destabilizing | None | N | 0.209 | neutral | None | None | None | None | N |
D/R | 0.1509 | likely_benign | 0.1627 | benign | 0.51 | Stabilizing | 0.018 | N | 0.513 | neutral | None | None | None | None | N |
D/S | 0.0661 | likely_benign | 0.0655 | benign | -0.45 | Destabilizing | None | N | 0.124 | neutral | None | None | None | None | N |
D/T | 0.0872 | likely_benign | 0.0872 | benign | -0.237 | Destabilizing | 0.018 | N | 0.453 | neutral | None | None | None | None | N |
D/V | 0.0767 | likely_benign | 0.081 | benign | 0.188 | Stabilizing | 0.013 | N | 0.561 | neutral | N | 0.49463915 | None | None | N |
D/W | 0.6873 | likely_pathogenic | 0.7295 | pathogenic | 0.341 | Stabilizing | 0.747 | D | 0.534 | neutral | None | None | None | None | N |
D/Y | 0.1349 | likely_benign | 0.1482 | benign | 0.399 | Stabilizing | 0.162 | N | 0.515 | neutral | N | 0.471289425 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.