Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 25981 | 78166;78167;78168 | chr2:178568191;178568190;178568189 | chr2:179432918;179432917;179432916 |
N2AB | 24340 | 73243;73244;73245 | chr2:178568191;178568190;178568189 | chr2:179432918;179432917;179432916 |
N2A | 23413 | 70462;70463;70464 | chr2:178568191;178568190;178568189 | chr2:179432918;179432917;179432916 |
N2B | 16916 | 50971;50972;50973 | chr2:178568191;178568190;178568189 | chr2:179432918;179432917;179432916 |
Novex-1 | 17041 | 51346;51347;51348 | chr2:178568191;178568190;178568189 | chr2:179432918;179432917;179432916 |
Novex-2 | 17108 | 51547;51548;51549 | chr2:178568191;178568190;178568189 | chr2:179432918;179432917;179432916 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/R | rs794729505 | -0.133 | 0.314 | N | 0.711 | 0.367 | 0.360565625551 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 3.27E-05 | None | 0 | 0 | 0 |
P/R | rs794729505 | -0.133 | 0.314 | N | 0.711 | 0.367 | 0.360565625551 | gnomAD-4.0.0 | 1.59174E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.43283E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.0526 | likely_benign | 0.0486 | benign | -0.933 | Destabilizing | None | N | 0.336 | neutral | N | 0.469204775 | None | None | N |
P/C | 0.2405 | likely_benign | 0.2456 | benign | -0.743 | Destabilizing | 0.823 | D | 0.773 | deleterious | None | None | None | None | N |
P/D | 0.5207 | ambiguous | 0.5462 | ambiguous | -0.669 | Destabilizing | 0.378 | N | 0.655 | prob.neutral | None | None | None | None | N |
P/E | 0.3692 | ambiguous | 0.3789 | ambiguous | -0.737 | Destabilizing | 0.147 | N | 0.619 | neutral | None | None | None | None | N |
P/F | 0.4196 | ambiguous | 0.43 | ambiguous | -0.86 | Destabilizing | 0.552 | D | 0.781 | deleterious | None | None | None | None | N |
P/G | 0.2279 | likely_benign | 0.2363 | benign | -1.155 | Destabilizing | 0.08 | N | 0.639 | neutral | None | None | None | None | N |
P/H | 0.2069 | likely_benign | 0.2154 | benign | -0.603 | Destabilizing | 0.934 | D | 0.711 | prob.delet. | None | None | None | None | N |
P/I | 0.2423 | likely_benign | 0.2265 | benign | -0.467 | Destabilizing | 0.378 | N | 0.761 | deleterious | None | None | None | None | N |
P/K | 0.3316 | likely_benign | 0.3365 | benign | -0.805 | Destabilizing | 0.147 | N | 0.623 | neutral | None | None | None | None | N |
P/L | 0.1355 | likely_benign | 0.1369 | benign | -0.467 | Destabilizing | 0.061 | N | 0.738 | deleterious | N | 0.490127695 | None | None | N |
P/M | 0.2606 | likely_benign | 0.2524 | benign | -0.421 | Destabilizing | 0.823 | D | 0.715 | prob.delet. | None | None | None | None | N |
P/N | 0.2918 | likely_benign | 0.2792 | benign | -0.558 | Destabilizing | 0.378 | N | 0.683 | prob.neutral | None | None | None | None | N |
P/Q | 0.1938 | likely_benign | 0.1917 | benign | -0.787 | Destabilizing | 0.314 | N | 0.665 | prob.neutral | N | 0.484811777 | None | None | N |
P/R | 0.2329 | likely_benign | 0.2614 | benign | -0.222 | Destabilizing | 0.314 | N | 0.711 | prob.delet. | N | 0.484811777 | None | None | N |
P/S | 0.0989 | likely_benign | 0.0959 | benign | -0.996 | Destabilizing | 0.002 | N | 0.377 | neutral | N | 0.470378211 | None | None | N |
P/T | 0.0888 | likely_benign | 0.0826 | benign | -0.957 | Destabilizing | 0.061 | N | 0.537 | neutral | N | 0.46617409 | None | None | N |
P/V | 0.1565 | likely_benign | 0.144 | benign | -0.586 | Destabilizing | 0.08 | N | 0.675 | prob.neutral | None | None | None | None | N |
P/W | 0.6725 | likely_pathogenic | 0.7131 | pathogenic | -0.96 | Destabilizing | 0.934 | D | 0.747 | deleterious | None | None | None | None | N |
P/Y | 0.4216 | ambiguous | 0.4374 | ambiguous | -0.677 | Destabilizing | 0.552 | D | 0.781 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.