Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 25986 | 78181;78182;78183 | chr2:178568176;178568175;178568174 | chr2:179432903;179432902;179432901 |
N2AB | 24345 | 73258;73259;73260 | chr2:178568176;178568175;178568174 | chr2:179432903;179432902;179432901 |
N2A | 23418 | 70477;70478;70479 | chr2:178568176;178568175;178568174 | chr2:179432903;179432902;179432901 |
N2B | 16921 | 50986;50987;50988 | chr2:178568176;178568175;178568174 | chr2:179432903;179432902;179432901 |
Novex-1 | 17046 | 51361;51362;51363 | chr2:178568176;178568175;178568174 | chr2:179432903;179432902;179432901 |
Novex-2 | 17113 | 51562;51563;51564 | chr2:178568176;178568175;178568174 | chr2:179432903;179432902;179432901 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/H | rs1706668829 | None | 0.988 | N | 0.587 | 0.256 | 0.324986149311 | gnomAD-4.0.0 | 2.40065E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.62501E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/A | 0.9555 | likely_pathogenic | 0.9583 | pathogenic | -0.626 | Destabilizing | 0.835 | D | 0.461 | neutral | None | None | None | None | N |
Y/C | 0.7634 | likely_pathogenic | 0.7647 | pathogenic | 0.074 | Stabilizing | 0.997 | D | 0.722 | deleterious | N | 0.461196886 | None | None | N |
Y/D | 0.8342 | likely_pathogenic | 0.8572 | pathogenic | 0.869 | Stabilizing | 0.012 | N | 0.49 | neutral | N | 0.459217067 | None | None | N |
Y/E | 0.9792 | likely_pathogenic | 0.981 | pathogenic | 0.851 | Stabilizing | 0.717 | D | 0.455 | neutral | None | None | None | None | N |
Y/F | 0.2258 | likely_benign | 0.2179 | benign | -0.303 | Destabilizing | 0.959 | D | 0.625 | neutral | N | 0.478540672 | None | None | N |
Y/G | 0.9485 | likely_pathogenic | 0.9499 | pathogenic | -0.807 | Destabilizing | 0.947 | D | 0.539 | neutral | None | None | None | None | N |
Y/H | 0.5705 | likely_pathogenic | 0.5755 | pathogenic | 0.242 | Stabilizing | 0.988 | D | 0.587 | neutral | N | 0.480400416 | None | None | N |
Y/I | 0.9199 | likely_pathogenic | 0.9334 | pathogenic | -0.174 | Destabilizing | 0.973 | D | 0.595 | neutral | None | None | None | None | N |
Y/K | 0.9716 | likely_pathogenic | 0.9749 | pathogenic | 0.164 | Stabilizing | 0.947 | D | 0.616 | neutral | None | None | None | None | N |
Y/L | 0.7389 | likely_pathogenic | 0.7594 | pathogenic | -0.174 | Destabilizing | 0.911 | D | 0.651 | prob.neutral | None | None | None | None | N |
Y/M | 0.9161 | likely_pathogenic | 0.9231 | pathogenic | -0.095 | Destabilizing | 0.998 | D | 0.612 | neutral | None | None | None | None | N |
Y/N | 0.6169 | likely_pathogenic | 0.6624 | pathogenic | -0.071 | Destabilizing | 0.87 | D | 0.639 | neutral | N | 0.493502999 | None | None | N |
Y/P | 0.9612 | likely_pathogenic | 0.9631 | pathogenic | -0.305 | Destabilizing | 0.973 | D | 0.686 | prob.delet. | None | None | None | None | N |
Y/Q | 0.9672 | likely_pathogenic | 0.9698 | pathogenic | -0.003 | Destabilizing | 0.973 | D | 0.575 | neutral | None | None | None | None | N |
Y/R | 0.9575 | likely_pathogenic | 0.962 | pathogenic | 0.39 | Stabilizing | 0.973 | D | 0.613 | neutral | None | None | None | None | N |
Y/S | 0.8161 | likely_pathogenic | 0.8329 | pathogenic | -0.474 | Destabilizing | 0.931 | D | 0.451 | neutral | N | 0.496388589 | None | None | N |
Y/T | 0.9554 | likely_pathogenic | 0.9624 | pathogenic | -0.402 | Destabilizing | 0.947 | D | 0.574 | neutral | None | None | None | None | N |
Y/V | 0.8998 | likely_pathogenic | 0.9124 | pathogenic | -0.305 | Destabilizing | 0.973 | D | 0.598 | neutral | None | None | None | None | N |
Y/W | 0.7537 | likely_pathogenic | 0.7503 | pathogenic | -0.449 | Destabilizing | 0.998 | D | 0.578 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.