Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 25990 | 78193;78194;78195 | chr2:178568164;178568163;178568162 | chr2:179432891;179432890;179432889 |
N2AB | 24349 | 73270;73271;73272 | chr2:178568164;178568163;178568162 | chr2:179432891;179432890;179432889 |
N2A | 23422 | 70489;70490;70491 | chr2:178568164;178568163;178568162 | chr2:179432891;179432890;179432889 |
N2B | 16925 | 50998;50999;51000 | chr2:178568164;178568163;178568162 | chr2:179432891;179432890;179432889 |
Novex-1 | 17050 | 51373;51374;51375 | chr2:178568164;178568163;178568162 | chr2:179432891;179432890;179432889 |
Novex-2 | 17117 | 51574;51575;51576 | chr2:178568164;178568163;178568162 | chr2:179432891;179432890;179432889 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/D | rs532095547 | -0.8 | 0.489 | N | 0.449 | 0.166 | 0.254244900254 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 3.27E-05 | None | 0 | 0 | 0 |
E/D | rs532095547 | -0.8 | 0.489 | N | 0.449 | 0.166 | 0.254244900254 | gnomAD-4.0.0 | 6.84301E-07 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.15939E-05 | 0 |
E/G | None | None | 0.321 | N | 0.593 | 0.205 | 0.257292322809 | gnomAD-4.0.0 | 1.59178E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.43291E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.1147 | likely_benign | 0.1418 | benign | -0.441 | Destabilizing | 0.006 | N | 0.286 | neutral | N | 0.448517284 | None | None | I |
E/C | 0.7161 | likely_pathogenic | 0.7777 | pathogenic | -0.03 | Destabilizing | 0.944 | D | 0.829 | deleterious | None | None | None | None | I |
E/D | 0.3555 | ambiguous | 0.3538 | ambiguous | -0.303 | Destabilizing | 0.489 | N | 0.449 | neutral | N | 0.48737899 | None | None | I |
E/F | 0.7475 | likely_pathogenic | 0.8165 | pathogenic | -0.324 | Destabilizing | 0.687 | D | 0.822 | deleterious | None | None | None | None | I |
E/G | 0.3002 | likely_benign | 0.3382 | benign | -0.639 | Destabilizing | 0.321 | N | 0.593 | neutral | N | 0.487125501 | None | None | I |
E/H | 0.697 | likely_pathogenic | 0.7679 | pathogenic | -0.158 | Destabilizing | 0.981 | D | 0.491 | neutral | None | None | None | None | I |
E/I | 0.1307 | likely_benign | 0.176 | benign | 0.047 | Stabilizing | 0.275 | N | 0.6 | neutral | None | None | None | None | I |
E/K | 0.2261 | likely_benign | 0.2918 | benign | 0.312 | Stabilizing | 0.489 | N | 0.492 | neutral | N | 0.475917316 | None | None | I |
E/L | 0.2469 | likely_benign | 0.3078 | benign | 0.047 | Stabilizing | 0.239 | N | 0.599 | neutral | None | None | None | None | I |
E/M | 0.265 | likely_benign | 0.3363 | benign | 0.192 | Stabilizing | 0.892 | D | 0.779 | deleterious | None | None | None | None | I |
E/N | 0.4375 | ambiguous | 0.4996 | ambiguous | 0.008 | Stabilizing | 0.931 | D | 0.507 | neutral | None | None | None | None | I |
E/P | 0.2825 | likely_benign | 0.3339 | benign | -0.096 | Destabilizing | 0.817 | D | 0.557 | neutral | None | None | None | None | I |
E/Q | 0.1621 | likely_benign | 0.2027 | benign | 0.039 | Stabilizing | 0.911 | D | 0.523 | neutral | N | 0.464590701 | None | None | I |
E/R | 0.4058 | ambiguous | 0.5077 | ambiguous | 0.481 | Stabilizing | 0.817 | D | 0.5 | neutral | None | None | None | None | I |
E/S | 0.2812 | likely_benign | 0.3395 | benign | -0.165 | Destabilizing | 0.239 | N | 0.433 | neutral | None | None | None | None | I |
E/T | 0.1839 | likely_benign | 0.2347 | benign | -0.001 | Destabilizing | 0.239 | N | 0.637 | neutral | None | None | None | None | I |
E/V | 0.0744 | likely_benign | 0.103 | benign | -0.096 | Destabilizing | 0.001 | N | 0.379 | neutral | N | 0.421946759 | None | None | I |
E/W | 0.9556 | likely_pathogenic | 0.9714 | pathogenic | -0.163 | Destabilizing | 0.981 | D | 0.796 | deleterious | None | None | None | None | I |
E/Y | 0.6909 | likely_pathogenic | 0.7541 | pathogenic | -0.08 | Destabilizing | 0.817 | D | 0.828 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.