Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 25994 | 78205;78206;78207 | chr2:178568152;178568151;178568150 | chr2:179432879;179432878;179432877 |
N2AB | 24353 | 73282;73283;73284 | chr2:178568152;178568151;178568150 | chr2:179432879;179432878;179432877 |
N2A | 23426 | 70501;70502;70503 | chr2:178568152;178568151;178568150 | chr2:179432879;179432878;179432877 |
N2B | 16929 | 51010;51011;51012 | chr2:178568152;178568151;178568150 | chr2:179432879;179432878;179432877 |
Novex-1 | 17054 | 51385;51386;51387 | chr2:178568152;178568151;178568150 | chr2:179432879;179432878;179432877 |
Novex-2 | 17121 | 51586;51587;51588 | chr2:178568152;178568151;178568150 | chr2:179432879;179432878;179432877 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/L | rs1375270001 | -0.436 | 0.999 | D | 0.912 | 0.613 | 0.915372335003 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.89E-06 | 0 |
P/L | rs1375270001 | -0.436 | 0.999 | D | 0.912 | 0.613 | 0.915372335003 | gnomAD-4.0.0 | 1.02646E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.34936E-05 | 0 | 0 |
P/S | None | None | 0.957 | D | 0.703 | 0.626 | 0.614897173524 | gnomAD-4.0.0 | 9.60257E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.05E-05 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.7964 | likely_pathogenic | 0.8047 | pathogenic | -2.186 | Highly Destabilizing | 0.992 | D | 0.799 | deleterious | D | 0.536573551 | None | None | N |
P/C | 0.9718 | likely_pathogenic | 0.9628 | pathogenic | -2.257 | Highly Destabilizing | 1.0 | D | 0.915 | deleterious | None | None | None | None | N |
P/D | 0.9997 | likely_pathogenic | 0.9997 | pathogenic | -3.27 | Highly Destabilizing | 0.999 | D | 0.86 | deleterious | None | None | None | None | N |
P/E | 0.9991 | likely_pathogenic | 0.9992 | pathogenic | -3.113 | Highly Destabilizing | 0.999 | D | 0.851 | deleterious | None | None | None | None | N |
P/F | 0.9997 | likely_pathogenic | 0.9997 | pathogenic | -1.33 | Destabilizing | 1.0 | D | 0.931 | deleterious | None | None | None | None | N |
P/G | 0.9923 | likely_pathogenic | 0.9933 | pathogenic | -2.639 | Highly Destabilizing | 0.997 | D | 0.861 | deleterious | None | None | None | None | N |
P/H | 0.9989 | likely_pathogenic | 0.999 | pathogenic | -2.155 | Highly Destabilizing | 1.0 | D | 0.91 | deleterious | None | None | None | None | N |
P/I | 0.9909 | likely_pathogenic | 0.9866 | pathogenic | -0.94 | Destabilizing | 1.0 | D | 0.913 | deleterious | None | None | None | None | N |
P/K | 0.9994 | likely_pathogenic | 0.9995 | pathogenic | -1.847 | Destabilizing | 0.999 | D | 0.858 | deleterious | None | None | None | None | N |
P/L | 0.9742 | likely_pathogenic | 0.9712 | pathogenic | -0.94 | Destabilizing | 0.999 | D | 0.912 | deleterious | D | 0.575313275 | None | None | N |
P/M | 0.9961 | likely_pathogenic | 0.9952 | pathogenic | -1.268 | Destabilizing | 1.0 | D | 0.913 | deleterious | None | None | None | None | N |
P/N | 0.9995 | likely_pathogenic | 0.9995 | pathogenic | -2.167 | Highly Destabilizing | 0.999 | D | 0.898 | deleterious | None | None | None | None | N |
P/Q | 0.9982 | likely_pathogenic | 0.9982 | pathogenic | -2.147 | Highly Destabilizing | 0.999 | D | 0.873 | deleterious | D | 0.565731396 | None | None | N |
P/R | 0.9972 | likely_pathogenic | 0.9975 | pathogenic | -1.511 | Destabilizing | 0.999 | D | 0.903 | deleterious | D | 0.565224417 | None | None | N |
P/S | 0.9838 | likely_pathogenic | 0.9851 | pathogenic | -2.69 | Highly Destabilizing | 0.957 | D | 0.703 | prob.neutral | D | 0.553957017 | None | None | N |
P/T | 0.9743 | likely_pathogenic | 0.9703 | pathogenic | -2.408 | Highly Destabilizing | 0.999 | D | 0.832 | deleterious | D | 0.553196549 | None | None | N |
P/V | 0.9579 | likely_pathogenic | 0.9358 | pathogenic | -1.33 | Destabilizing | 1.0 | D | 0.901 | deleterious | None | None | None | None | N |
P/W | 0.9999 | likely_pathogenic | 0.9999 | pathogenic | -1.742 | Destabilizing | 1.0 | D | 0.891 | deleterious | None | None | None | None | N |
P/Y | 0.9998 | likely_pathogenic | 0.9998 | pathogenic | -1.443 | Destabilizing | 1.0 | D | 0.933 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.