Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 25998 | 78217;78218;78219 | chr2:178568140;178568139;178568138 | chr2:179432867;179432866;179432865 |
N2AB | 24357 | 73294;73295;73296 | chr2:178568140;178568139;178568138 | chr2:179432867;179432866;179432865 |
N2A | 23430 | 70513;70514;70515 | chr2:178568140;178568139;178568138 | chr2:179432867;179432866;179432865 |
N2B | 16933 | 51022;51023;51024 | chr2:178568140;178568139;178568138 | chr2:179432867;179432866;179432865 |
Novex-1 | 17058 | 51397;51398;51399 | chr2:178568140;178568139;178568138 | chr2:179432867;179432866;179432865 |
Novex-2 | 17125 | 51598;51599;51600 | chr2:178568140;178568139;178568138 | chr2:179432867;179432866;179432865 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
F/L | None | None | 0.999 | N | 0.535 | 0.443 | 0.243398259712 | gnomAD-4.0.0 | 1.59185E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.43287E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
F/A | 0.4609 | ambiguous | 0.5599 | ambiguous | -2.2 | Highly Destabilizing | 1.0 | D | 0.776 | deleterious | None | None | None | None | N |
F/C | 0.3072 | likely_benign | 0.3541 | ambiguous | -0.768 | Destabilizing | 1.0 | D | 0.858 | deleterious | N | 0.489985479 | None | None | N |
F/D | 0.7844 | likely_pathogenic | 0.8455 | pathogenic | -1.209 | Destabilizing | 1.0 | D | 0.869 | deleterious | None | None | None | None | N |
F/E | 0.7551 | likely_pathogenic | 0.8158 | pathogenic | -1.135 | Destabilizing | 1.0 | D | 0.859 | deleterious | None | None | None | None | N |
F/G | 0.7794 | likely_pathogenic | 0.841 | pathogenic | -2.523 | Highly Destabilizing | 1.0 | D | 0.843 | deleterious | None | None | None | None | N |
F/H | 0.4526 | ambiguous | 0.5019 | ambiguous | -0.803 | Destabilizing | 1.0 | D | 0.836 | deleterious | None | None | None | None | N |
F/I | 0.1873 | likely_benign | 0.2149 | benign | -1.224 | Destabilizing | 1.0 | D | 0.727 | prob.delet. | N | 0.446271987 | None | None | N |
F/K | 0.7084 | likely_pathogenic | 0.7746 | pathogenic | -1.085 | Destabilizing | 1.0 | D | 0.867 | deleterious | None | None | None | None | N |
F/L | 0.7777 | likely_pathogenic | 0.8255 | pathogenic | -1.224 | Destabilizing | 0.999 | D | 0.535 | neutral | N | 0.457219699 | None | None | N |
F/M | 0.4296 | ambiguous | 0.4849 | ambiguous | -0.736 | Destabilizing | 1.0 | D | 0.732 | prob.delet. | None | None | None | None | N |
F/N | 0.5771 | likely_pathogenic | 0.6604 | pathogenic | -1.1 | Destabilizing | 1.0 | D | 0.882 | deleterious | None | None | None | None | N |
F/P | 0.9936 | likely_pathogenic | 0.9965 | pathogenic | -1.544 | Destabilizing | 1.0 | D | 0.872 | deleterious | None | None | None | None | N |
F/Q | 0.6186 | likely_pathogenic | 0.6879 | pathogenic | -1.227 | Destabilizing | 1.0 | D | 0.877 | deleterious | None | None | None | None | N |
F/R | 0.6137 | likely_pathogenic | 0.6809 | pathogenic | -0.381 | Destabilizing | 1.0 | D | 0.881 | deleterious | None | None | None | None | N |
F/S | 0.3074 | likely_benign | 0.3958 | ambiguous | -1.812 | Destabilizing | 1.0 | D | 0.835 | deleterious | N | 0.441535384 | None | None | N |
F/T | 0.3456 | ambiguous | 0.4249 | ambiguous | -1.651 | Destabilizing | 1.0 | D | 0.847 | deleterious | None | None | None | None | N |
F/V | 0.1701 | likely_benign | 0.1938 | benign | -1.544 | Destabilizing | 1.0 | D | 0.795 | deleterious | N | 0.422683051 | None | None | N |
F/W | 0.4629 | ambiguous | 0.4763 | ambiguous | -0.484 | Destabilizing | 1.0 | D | 0.705 | prob.neutral | None | None | None | None | N |
F/Y | 0.1551 | likely_benign | 0.1574 | benign | -0.682 | Destabilizing | 0.999 | D | 0.493 | neutral | N | 0.415911794 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.