Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 26002 | 78229;78230;78231 | chr2:178568128;178568127;178568126 | chr2:179432855;179432854;179432853 |
N2AB | 24361 | 73306;73307;73308 | chr2:178568128;178568127;178568126 | chr2:179432855;179432854;179432853 |
N2A | 23434 | 70525;70526;70527 | chr2:178568128;178568127;178568126 | chr2:179432855;179432854;179432853 |
N2B | 16937 | 51034;51035;51036 | chr2:178568128;178568127;178568126 | chr2:179432855;179432854;179432853 |
Novex-1 | 17062 | 51409;51410;51411 | chr2:178568128;178568127;178568126 | chr2:179432855;179432854;179432853 |
Novex-2 | 17129 | 51610;51611;51612 | chr2:178568128;178568127;178568126 | chr2:179432855;179432854;179432853 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/M | None | None | 0.171 | N | 0.343 | 0.111 | 0.344945010812 | gnomAD-4.0.0 | 2.05303E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.69876E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.1684 | likely_benign | 0.2077 | benign | -1.698 | Destabilizing | 0.007 | N | 0.274 | neutral | None | None | None | None | N |
I/C | 0.4416 | ambiguous | 0.4646 | ambiguous | -1.208 | Destabilizing | 0.356 | N | 0.331 | neutral | None | None | None | None | N |
I/D | 0.6418 | likely_pathogenic | 0.7277 | pathogenic | -1.21 | Destabilizing | 0.072 | N | 0.478 | neutral | None | None | None | None | N |
I/E | 0.5602 | ambiguous | 0.6369 | pathogenic | -1.211 | Destabilizing | 0.072 | N | 0.451 | neutral | None | None | None | None | N |
I/F | 0.1308 | likely_benign | 0.1495 | benign | -1.472 | Destabilizing | None | N | 0.099 | neutral | N | 0.508614099 | None | None | N |
I/G | 0.4346 | ambiguous | 0.5236 | ambiguous | -2.008 | Highly Destabilizing | 0.072 | N | 0.39 | neutral | None | None | None | None | N |
I/H | 0.4394 | ambiguous | 0.5139 | ambiguous | -1.365 | Destabilizing | 0.214 | N | 0.449 | neutral | None | None | None | None | N |
I/K | 0.3764 | ambiguous | 0.4473 | ambiguous | -0.966 | Destabilizing | 0.072 | N | 0.453 | neutral | None | None | None | None | N |
I/L | 0.1016 | likely_benign | 0.1015 | benign | -0.919 | Destabilizing | 0.002 | N | 0.231 | neutral | N | 0.462262947 | None | None | N |
I/M | 0.1056 | likely_benign | 0.1108 | benign | -0.725 | Destabilizing | 0.171 | N | 0.343 | neutral | N | 0.47286695 | None | None | N |
I/N | 0.212 | likely_benign | 0.2813 | benign | -0.807 | Destabilizing | 0.055 | N | 0.521 | neutral | N | 0.48362737 | None | None | N |
I/P | 0.5078 | ambiguous | 0.5769 | pathogenic | -1.149 | Destabilizing | 0.356 | N | 0.521 | neutral | None | None | None | None | N |
I/Q | 0.3919 | ambiguous | 0.458 | ambiguous | -1.021 | Destabilizing | 0.356 | N | 0.501 | neutral | None | None | None | None | N |
I/R | 0.2929 | likely_benign | 0.356 | ambiguous | -0.455 | Destabilizing | 0.356 | N | 0.509 | neutral | None | None | None | None | N |
I/S | 0.1736 | likely_benign | 0.2237 | benign | -1.449 | Destabilizing | 0.012 | N | 0.358 | neutral | N | 0.478117833 | None | None | N |
I/T | 0.1387 | likely_benign | 0.1742 | benign | -1.331 | Destabilizing | None | N | 0.146 | neutral | N | 0.475808247 | None | None | N |
I/V | 0.0581 | likely_benign | 0.0574 | benign | -1.149 | Destabilizing | None | N | 0.073 | neutral | N | 0.395824524 | None | None | N |
I/W | 0.767 | likely_pathogenic | 0.7937 | pathogenic | -1.536 | Destabilizing | 0.628 | D | 0.415 | neutral | None | None | None | None | N |
I/Y | 0.4349 | ambiguous | 0.4873 | ambiguous | -1.257 | Destabilizing | None | N | 0.113 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.