Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 26003 | 78232;78233;78234 | chr2:178568125;178568124;178568123 | chr2:179432852;179432851;179432850 |
N2AB | 24362 | 73309;73310;73311 | chr2:178568125;178568124;178568123 | chr2:179432852;179432851;179432850 |
N2A | 23435 | 70528;70529;70530 | chr2:178568125;178568124;178568123 | chr2:179432852;179432851;179432850 |
N2B | 16938 | 51037;51038;51039 | chr2:178568125;178568124;178568123 | chr2:179432852;179432851;179432850 |
Novex-1 | 17063 | 51412;51413;51414 | chr2:178568125;178568124;178568123 | chr2:179432852;179432851;179432850 |
Novex-2 | 17130 | 51613;51614;51615 | chr2:178568125;178568124;178568123 | chr2:179432852;179432851;179432850 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/P | None | None | 0.896 | N | 0.393 | 0.345 | 0.230578612272 | gnomAD-4.0.0 | 1.59201E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.43308E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.1187 | likely_benign | 0.1305 | benign | -0.56 | Destabilizing | 0.201 | N | 0.401 | neutral | N | 0.473916906 | None | None | N |
S/C | 0.1116 | likely_benign | 0.1191 | benign | -0.52 | Destabilizing | 0.99 | D | 0.389 | neutral | N | 0.518634566 | None | None | N |
S/D | 0.5752 | likely_pathogenic | 0.6515 | pathogenic | -1.141 | Destabilizing | 0.447 | N | 0.376 | neutral | None | None | None | None | N |
S/E | 0.7536 | likely_pathogenic | 0.8114 | pathogenic | -1.134 | Destabilizing | 0.617 | D | 0.381 | neutral | None | None | None | None | N |
S/F | 0.3183 | likely_benign | 0.3767 | ambiguous | -0.815 | Destabilizing | 0.896 | D | 0.428 | neutral | N | 0.475184354 | None | None | N |
S/G | 0.096 | likely_benign | 0.1013 | benign | -0.811 | Destabilizing | 0.4 | N | 0.362 | neutral | None | None | None | None | N |
S/H | 0.4415 | ambiguous | 0.498 | ambiguous | -1.432 | Destabilizing | 0.92 | D | 0.396 | neutral | None | None | None | None | N |
S/I | 0.4313 | ambiguous | 0.4843 | ambiguous | 0.001 | Stabilizing | 0.739 | D | 0.401 | neutral | None | None | None | None | N |
S/K | 0.7774 | likely_pathogenic | 0.8217 | pathogenic | -0.872 | Destabilizing | 0.617 | D | 0.387 | neutral | None | None | None | None | N |
S/L | 0.1376 | likely_benign | 0.1534 | benign | 0.001 | Stabilizing | 0.447 | N | 0.398 | neutral | None | None | None | None | N |
S/M | 0.2434 | likely_benign | 0.2637 | benign | 0.399 | Stabilizing | 0.977 | D | 0.39 | neutral | None | None | None | None | N |
S/N | 0.1703 | likely_benign | 0.1894 | benign | -1.009 | Destabilizing | 0.021 | N | 0.153 | neutral | None | None | None | None | N |
S/P | 0.8849 | likely_pathogenic | 0.9224 | pathogenic | -0.152 | Destabilizing | 0.896 | D | 0.393 | neutral | N | 0.507024771 | None | None | N |
S/Q | 0.6308 | likely_pathogenic | 0.6769 | pathogenic | -1.192 | Destabilizing | 0.92 | D | 0.397 | neutral | None | None | None | None | N |
S/R | 0.7031 | likely_pathogenic | 0.7546 | pathogenic | -0.737 | Destabilizing | 0.85 | D | 0.381 | neutral | None | None | None | None | N |
S/T | 0.0727 | likely_benign | 0.0714 | benign | -0.857 | Destabilizing | 0.001 | N | 0.059 | neutral | N | 0.410311187 | None | None | N |
S/V | 0.3467 | ambiguous | 0.3915 | ambiguous | -0.152 | Destabilizing | 0.447 | N | 0.392 | neutral | None | None | None | None | N |
S/W | 0.5385 | ambiguous | 0.5946 | pathogenic | -0.891 | Destabilizing | 0.992 | D | 0.513 | neutral | None | None | None | None | N |
S/Y | 0.2909 | likely_benign | 0.3332 | benign | -0.576 | Destabilizing | 0.896 | D | 0.421 | neutral | N | 0.478284999 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.